Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3306 ATGCCAAATTTGCATTTCATTTTCTGTGTTATGACATTCTTCCTTGTTCTTCTTCTTCAAAATCCTAGTGTGATAAATTGCCACACAAAGGGACTTAGGCCAAGACGTTCATCACCGACCAACATGAGCAGAGTACTGTATTCAGAACAACAATTCATGAAATGGGTCAACTTTGTTGGTACCTTGAAACACTCTGTTTTTAAGGTTGCCAAAAATAAGCTCTTTGCGTCTTACACTTTGCACGTTGATAAGAACCCTGCACTTGGAGATTTCACCTCAATTCAAGATGCCATTGATTCCCTTCCATCCATCAATCTTGTTAGAGTCATCATCAAGGTCCATGCAGGGGTTTACACGGAGAAAGTTAATATTCCTGCTTTGAAATCATTCATAACAATAGAAGGAGCTGGTGCCGATAAAACCACTGTTGAATGGGGTGACACAGCTCAAACACTTGGCCCTGGAGGGAGGCCACTTGGAACCTACGGTTCTGCTACTTTTGCCGTTAATTCACCTTATTTCATTGCCAAGAACATCACTTTCAAAAACACAACACCAGTGCCAGCAGCGGGAGCAATAGGAAAACAAGCAGTAGCATTGAGGATATCAGCGGACACAGCATCGTTCGTGGGATGCAATTTCTTGGGAGCACAGGACACGCTGTACGATCATGTGGGGAGGCATTACTACAAGGATTGCTACATAGAAGGCTCAGTGGACTTCATATTCGGGAATGCGCTGTCGCTGTACGAGGGGTGTCACGTGCACGCCATAGCGCACAACACGGGGGCGGTGACAGCGCAAGGGAGGAGCAGCATGCTGGACGACACCGGCTTCTCCTTCGTCAACTGCAAGGTCACCGGCTCTGGGGCGCTCTACCTTGGCAGGGCCTGGGGGCCCTTTTCTCGCGTCGTCTTTGCTTACACCTATATGGACAACATCATCATTCCCAAAGGCTGGTACAATTGGGGCGACCCTAACCGTGAACTGACTGTATTCTATGGACAATACAAATGCACAGGTCCTGGAGCTAGCTTTGCAGGAAGAGTGTCATGGTCAAGAGAACTCACTGACGAAGAAGCTAAGCCTTTTCTTTCACTTACCTTCATTGATGGCTCTGAATGGATCAATATTTTATAA 1140 0.4658 MPNLHFIFCVMTFFLVLLLQNPSVINCHTKGLRPRRSSPTNMSRVLYSEQQFMKWVNFVGTLKHSVFKVAKNKLFASYTLHVDKNPALGDFTSIQDAIDSLPSINLVRVIIKVHAGVYTEKVNIPALKSFITIEGAGADKTTVEWGDTAQTLGPGGRPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAAGAIGKQAVALRISADTASFVGCNFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIAHNTGAVTAQGRSSMLDDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNRELTVFYGQYKCTGPGASFAGRVSWSRELTDEEAKPFLSLTFIDGSEWINIL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3306 379 Pfam Pectinesterase 89 372 IPR000070 GO:0030599|GO:0042545
Aev05g3306 379 ProSitePatterns Pectinesterase signature 2. 235 244 IPR033131 -
Aev05g3306 379 Gene3D - 75 378 IPR012334 -
Aev05g3306 379 PANTHER PECTINESTERASE 7 377 - -
Aev05g3306 379 SUPERFAMILY Pectin lyase-like 76 378 IPR011050 -
Aev05g3306 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3306 Aev-Chr5 32719543 32722526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3306 90 376 Carbohydrate Esterase AT5G47500 51.042 9.72e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3306 K01051 - gmx:100793314 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3306 05 32719543 32722526 Aev05g3306 05 32719543 32722526 ECH