Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3301 ATGAAGACCAAGACCCCATTGAAGCAGCTCAAGCTCTCTGTTCCTGCTCAAGAAACCCCCATTACTTCATTCCTGACTGCAAGTGGCACATTCCATGATGGAGATCTGCTGTTGAATCAGAAAGGACTGCGTCTCATATCTGAAGAGAAAGAATCAAGGCCTTCTGATGGAAAGGAGCTGGAATTCGACTTCACGCTGGATGACCTTGAGACTGTTAAAGTAATTGGAAAAGGCAGTGGTGGTGTTGTACAACTTGTTCGCCACAAGTGGGTTGGAAGATTGTTTGCTTTAAAGGTCATTCAGATGAATATACAAGAGGAGATTCGAAGACAAATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGCCCACATGTTGTGGTTTGCTACCACTCATTCTATCATAATGGAGTCATATCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTGGCAGATGTGGTTAGGCAAGTTAAAACAATTCTGGAGCCATATCTTGCCGTGGTTTGTAAGCAGGTGTTACAAGGTCTTGTTTACTTGCATAACGAAAGATATGTGATTCATAGGGATATCAAACCCTCCAATCTTTTAGTCAATCACAAAGGGGAGGTGAAGATAACTGATTTTGGTGTTAGTGCTATGCTGGCAAGTTCAATGGGCCAAAGAGATACATTTGTTGGAACTTACAACTACATGTCGCCAGAAAGAATTAGTGGGAGTACTTATGATTATAGCAGTGATATCTGGAGTTTAGGCTTGGTAGTCCTTGAATGTGCCATTGGAAGGTTCCCTTACATACAATCTGAGGATCAGCAAAGCTGCCCTACTTTTTATGAGCTTTTGGAAGCAATTGTGGAACGCCCCCCACCTTCGGCTCCCGCTGATCAGTTCTCTCCAGAGTTCTGTTCCTTTGTATCATCCTGCATCCAAAAGGATCCTAGGGACAGATTAACATCCTTGGAGCTTCTGGGTCATCCTTTCATAAAAAAGTTTGAAGATAAAGACCTAGATCTTGGGATTTTGCACATGATGGAAAACAAGGCACACCAAGTGTTTGTAGAAATGAATGTGATGAAGGGAATAATGGGTGGTGGTTGTGATGGAGGTAGAAACACCAATTGGGTGGTCAAGGAATGTGTCAGCAATGATTCAATATCAATTGGGTCAATCTCAGAAGAAGATTCAATGGATTCTTTGTGTTCATCTTCATCAGAGTTGACTGAAGAGGCATCTTCAACCTCTTGTTCTTCATCCTCACATTCAAATGGACCTTTATATGAACTATCAGAGCTCATGAATCATCTCCCTATAAAGAGAGGGCTATCTATGTTTTACCAAGGGAAGGCTCAATCTTTCACTTCCTTAGAAAGGGTTCAGAGCATAGAAGATCTTCCTAAGAAATGCATACCTTACAACAAGAGAATGAAGTCATGCAAAAGCTTTGGGGGAGACTTGGATAACCATAGAATATCATTCACTCCAAAAGCTAAAATATCAAAGAACTCCAAGAGGGTCTTTTGTGTCTCTACTAAACAAAAGAGGGGGTCTCCTTGGAGGGTCTAG 1566 0.4176 MKTKTPLKQLKLSVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDGKELEFDFTLDDLETVKVIGKGSGGVVQLVRHKWVGRLFALKVIQMNIQEEIRRQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHNERYVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGLVVLECAIGRFPYIQSEDQQSCPTFYELLEAIVERPPPSAPADQFSPEFCSFVSSCIQKDPRDRLTSLELLGHPFIKKFEDKDLDLGILHMMENKAHQVFVEMNVMKGIMGGGCDGGRNTNWVVKECVSNDSISIGSISEEDSMDSLCSSSSELTEEASSTSCSSSSHSNGPLYELSELMNHLPIKRGLSMFYQGKAQSFTSLERVQSIEDLPKKCIPYNKRMKSCKSFGGDLDNHRISFTPKAKISKNSKRVFCVSTKQKRGSPWRV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3301 521 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Aev05g3301 521 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3301 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Aev05g3301 521 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 343 - -
Aev05g3301 521 Gene3D Transferase(Phosphotransferase) domain 1 150 357 - -
Aev05g3301 521 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3301 521 CDD PKc_MAPKK_plant_like 67 333 - -
Aev05g3301 521 SUPERFAMILY Protein kinase-like (PK-like) 66 330 IPR011009 -
Aev05g3301 521 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3301 521 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Aev05g3301 521 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3301 Aev-Chr5 32680982 32687785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3301 1 342 MAP Kinase Kinase Gene Family AT5G56580 86.006 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aev05g3301 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3301 K04368 - gmx:100786284 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3301 05 32680982 32687785 Aev05g3301 05 32680982 32687785 ECH