Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3294 ATGAAGATCGAGGAATTGGACGATGGGGAGCGTTGTGCGGACGAAGAGTGGAAGAACGAGAGGCAGATCGTGACTGTTGACGCTAAGAGAGCGTTGGTTGGAGCTGGTGCAAGGATCCTGTTTTACCCTACTCTTTTGTACAATGTGCTTCGGAATAAGATTGAAGCTGAGTTTAGGTGGTGGGATGAAGTTGACGAGTTTGTATTACTGGGCGCTGTTCCGTTCCCGAAGATGTTCCCGCTTGAAGAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAGCCTTATGAAACTTTGGTGCCTTCATCATTGTATCATACTCATGGGATTGATCATCTGGTAATTCCAACAAGGGATTATCTGTTTGCCCCCTCATTTGTGGATATCAGCAGGGCTGTGCAATTCATTCATCAGAATGCAACTAGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGACGTGGGAGGAGTACAACCATAGTGCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCTGCCATGGAATATGTGAGGTCTCGAAGACCTAGAGTGCTGCTAGCACCATCTCAGTGGAAGGCTGTTCAAAAGTTTAGCAAGCGCAGAGCATCTTCTTTACCATACTCTCCCTCTGCAGATGCGGTGCTTATAACCAAAGATGATCTTGAAGGTTACCATAGCACATGCCATGCTGGTATGGAGCTGGCAATTGTTCCTAAGGTGCCAAAGAAGACCAGGCCCATGATAGCAAGATTGTCGTGCCTGTTTACATCATTAAAAGTTTCCGGTAACAGCGTACCGCCGTCCAGACGGCTGCCTGTTTCCGAGGCACTTGCTTGTTAG 849 0.4676 MKIEELDDGERCADEEWKNERQIVTVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFVLLGAVPFPKMFPLEELGVGGVITLNEPYETLVPSSLYHTHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNATSGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAAMEYVRSRRPRVLLAPSQWKAVQKFSKRRASSLPYSPSADAVLITKDDLEGYHSTCHAGMELAIVPKVPKKTRPMIARLSCLFTSLKVSGNSVPPSRRLPVSEALAC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3294 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Aev05g3294 282 PANTHER OS01G0739200 PROTEIN 1 275 - -
Aev05g3294 282 Pfam Dual specificity phosphatase, catalytic domain 99 201 IPR000340 GO:0008138|GO:0016311
Aev05g3294 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 206 IPR020422 GO:0006470|GO:0008138
Aev05g3294 282 PANTHER - 1 275 - -
Aev05g3294 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Aev05g3294 282 CDD PTPMT1 60 203 IPR044596 GO:0004721
Aev05g3294 282 SMART dsp_5 63 203 IPR020422 GO:0006470|GO:0008138
Aev05g3294 282 Gene3D Protein tyrosine phosphatase superfamily 60 206 IPR029021 -
Aev05g3294 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3294 Aev-Chr5 32647159 32648895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3294 4 262 Protein tyrosine phosphatase (PTP) family AT2G35680 51.839 8.88e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3294 - - gmx:100817410 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3294 05 32647159 32648895 Aev05g3294 05 32647159 32648895 ECH