Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3293 ATGAATAATAGTAATCATAAAATGATGAGTAGCAGTGTTAGTGTTGTGAGCAGCACCACAACTGATCTGATAGATGCAAAGCTTGAAGAGCATCAATTGTGTGGATCCAACAAGCAGTGCCCCGGTTGCGGACACAAATTCGAAGCCAAACCGGATTGGCTAGGTCTACCAGCAGGAGTGAAGTTTGATCCCACAGACCAAGAACTAATAGAGCACCTTGAAGCCAAAGTGGAAGCAAAAAACATGAAATCACACCCTTTGATTGATGAATTCATTCCTACCATTGAAGGAGAAGATGGTATTTGTTATACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGTAGGCATTTTTTCCACAGGCCATCAAAGGCATACACAACGGGGACAAGAAAGAGGAGGAAGATCCAAAACGAGTGCGACTTGCAAGGCGGCGAAACGCGGTGGCACAAGACGGGGAAGACGAGGCCGGTGATGGTGAACGGGAAGCAGAAAGGATGCAAGAAGATCCTTGTGCTGTACACAAACTTCGGGAAGAATCGGAAGCCGGAGAAGACGAATTGGGTGATGCATCAGTACCATTTGGGGCAGAATGAGGAGGAGAAGGAAGGCGAGCTTGTTGTGTCTAAGATCTTCTACCAAACACAGCCTAGGCAGTGTAATTGGTCTGATAGGATGACTAGTGCATCAACCGCCACCACAGCGGGCGAAGCACCAAGTGGGAGTGGGAGTTGTTCTTCTTCTAAAGACAACAATAATACTATTAATGTTGCTCATCATAGGGATCATGAGATGATGTCTGGACTTGTGCCTCCAATGCCTTCTACTTTTGCTCATGCTTTGGATCTTCATCATCAATTTAAATCATCCGACCATTTCAGCTTCATCCCTTTCCGCAAAACCTTTGATGAGGTTGGAATAGGAGAGGGTTCAACAGGAAGAGGAAGAGAAGTTCAAGCATCGGGGTCATGTGAGGAAATACATGAACAACGGCATCATCAACATATAGTTCAACATCAAAATCAACAACAACATCATCAGATTGCAACCTCGGCATTCCATATAAGTAGGCCTTCACATCCAATCTCTGCCATAATCTCTCCGCCGCCACTCCATCACACATCCATCATCCTAGATGAAAGCTCCTACCAAGTCTCCAGAATCTTGCTCCAAAATGACCATTTCCACCAGCAACAGCAACAGCAACAACATCATCATAAACTAGGAGCAAGCTCTGCGTCTGGTTTGGAGGAAATCATAATGGGGTGCACTTCTTCAACTGATATCAAAGAGGAGTCATCCATCAACAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCCTATTGGCCAGATCCTGACAACCCGGATCACCATCATCATCATGGCTAG 1401 0.454 MNNSNHKMMSSSVSVVSSTTTDLIDAKLEEHQLCGSNKQCPGCGHKFEAKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQNEEEKEGELVVSKIFYQTQPRQCNWSDRMTSASTATTAGEAPSGSGSCSSSKDNNNTINVAHHRDHEMMSGLVPPMPSTFAHALDLHHQFKSSDHFSFIPFRKTFDEVGIGEGSTGRGREVQASGSCEEIHEQRHHQHIVQHQNQQQHHQIATSAFHISRPSHPISAIISPPPLHHTSIILDESSYQVSRILLQNDHFHQQQQQQQHHHKLGASSASGLEEIIMGCTSSTDIKEESSINNPQEAEWLKYSSYWPDPDNPDHHHHHG* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3293 466 ProSiteProfiles NAC domain profile. 56 217 IPR003441 GO:0003677|GO:0006355
Aev05g3293 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 14 449 - -
Aev05g3293 466 MobiDBLite consensus disorder prediction 231 257 - -
Aev05g3293 466 Gene3D NAC domain 65 221 IPR036093 GO:0003677|GO:0006355
Aev05g3293 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 14 449 IPR044799 GO:0003700
Aev05g3293 466 SUPERFAMILY NAC domain 50 217 IPR036093 GO:0003677|GO:0006355
Aev05g3293 466 Pfam No apical meristem (NAM) protein 57 198 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3293 Aev-Chr5 32636550 32641012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3293 16 460 NAC Transcription Factor Family AT5G56620 51.168 2.43e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g3293 NAM 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3293 - - gmx:100795246 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3293 05 32636550 32641012 Aev05g3293 05 32636550 32641012 ECH