Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3267 ATGGGAAGGAAGTATAATGGCCTCATAGTTCCACCACAAGACAGGAAGAAAGGAGTTCCATGGACGGAAGAAGAGCACAGAACATTCCTGGTTGGGCTTGAGAAGCTGGGAAAAGGGGATTGGAGGGGTATCTCAAGAAACTATGTGACTACAAGAACACCAACCCAAGTTGCAAGCCATGCTCAGAAGTACTTTCTCAGATTGGCAATGATTCATAAGAAGAAGAGACGCTCAAGTCTCTTTGACACGGTTGGGATAATAAGCAACACAAGGACAAGACCAATATTATCTGAAAATGTGAAATCCAAATGTGAGGAAGAAGTAGTTGAGATCAACAATGATGCCACTTTGTCACTTCTTTTAGGTACTCCATTATTTCATCAACAAGTAGAAACCAATTCCTCACAAGATCATCAGCAAAAAACTATAATTGATGATGATGAATTTATTAATAATAATAAAAGTGTGCCTTTCTGGCTTCATCATCATCACCAGCAGCAAATAATGAATAATAATAATTTTTCAAAAGTAGCCTCGAAGAAGAATAATAATGGAGGATTGCCTGATTTGGAGCTAACTCTTGCAGCCGCCCCAAAGGCTAAGACTAAGATCTTGGAACCAAATGAATCATCACAAGCTTCCTTCCTTCTTGGCCCAATTACTGTGTGA 669 0.3946 MGRKYNGLIVPPQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAMIHKKKRRSSLFDTVGIISNTRTRPILSENVKSKCEEEVVEINNDATLSLLLGTPLFHQQVETNSSQDHQQKTIIDDDEFINNNKSVPFWLHHHHQQQIMNNNNFSKVASKKNNNGGLPDLELTLAAAPKAKTKILEPNESSQASFLLGPITV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3267 222 SUPERFAMILY Homeodomain-like 15 68 IPR009057 -
Aev05g3267 222 Gene3D - 19 71 - -
Aev05g3267 222 PANTHER TRANSCRIPTION FACTOR KUA1 6 215 - -
Aev05g3267 222 ProSiteProfiles SANT domain profile. 21 69 IPR017884 -
Aev05g3267 222 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 16 67 IPR006447 GO:0003677
Aev05g3267 222 CDD SANT 20 65 IPR001005 -
Aev05g3267 222 Pfam Myb-like DNA-binding domain 20 65 IPR001005 -
Aev05g3267 222 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 6 215 - -
Aev05g3267 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 69 IPR017930 -
Aev05g3267 222 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Aev05g3267 222 SMART sant 17 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3267 Aev-Chr5 32463641 32465199 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3267 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3267 - - pvu:PHAVU_004G171200g 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3267 05 32463641 32465199 Aev05g3267 05 32463641 32465199 ECH