Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3250 ATGAAGACGCACCCTGACGGTACCGCCGCCGCTGCCTCCGCCGCATCCAATCCCGCCGAAGAGAAGAAGAGCATAAACCCGAAGCTATGGCAAGCGTGTGCGGGGCCACTGGTGAACCTTCCACCGGCGGGGACTCACGTCATCTACTTCCCTCAAGGCCACTCCGAGCAGGTTGCTGCGTCTTTGAAGAAAGATGCTGATGCACAGATTCCAAACTATCCTAATCTTCCTTCCAAGTTGCTGTGTCTCCTTCACAATGTTACCTTGCATGCTGACCCGGAAACTGATGAAGTTTATGCTCAGATGACACTTCAACCTGTGCCTTCTTTTGATAAGGAAGCATTGTTGAGATCAGATCTTGCTCTCAAGTCAAATAAGCCACAGCCTGAGTTTTTCTGCAAACAGCTGACAGCAAGCGATACAAGTACCCATGGAGGTTTTTCCGTGCCACGCCGAGCGGCAGAGAAGATTTTCCCTCCTCTTGACTATTCTATGCAACCTCCTGCTCAAGAACTTGTGGCTAGGGATTTGCATGATAATGTTTGGACATTCCGCCATATATACCGAGGGCAACCAAAACGTCACTTGCTTACAACTGGATGGAGCCTATTTGTCAGTGGAAAGAGGCTTTTTGCCGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGCTTCTTTTGGGTATCAGACGAGCTAACAGGCAACCGACCAACATATCATCCTCAGTACTATCGAGTGATAGTATGCACATTGGGATTCTTGCTGCAGCTGCTCATGCTGCTGCAAACAATAGTCCCTTCACCATCTTCTTTAATCCTAGGGCTAGTCCATCGGAATTTGTCATTCCTTTAGCCAAGTACTACAAGGCAGTGTACAGCCATCAAATATCAGCCGGCATGCGCTTCCGAATGATGTTTGAAACTGAAGATTCAGGAACAAGAAGGTATATGGGTACAATTACAGGTATCAGTGATCTGGATCCTGTGAGATGGAAAAATTCACAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAGAAGCGTAGCAGGGTCTCAATCTGGGAAATTGAACCCGTGACTGCTCCTTTTTTCATCTGCCCTCCCCCGTTCTTTAGAGCCAAGAGGCCAAGACAACCAGGAATGCCTGATGATGACCCATCCGATTTTGAAAACCTTTTCAAGCGGACAATGCCTTGGCTTGGTGACGATATGTGCATGAAGGATCCCCAAGGTCTACCTGGCCTGAGCTTAGTTCAGTGGATGAACATGCAGCAGAATCCTGCTATGGCTAACTCATTGCAGACAAATTATATGCCTTCCTTGTCTGGATCTGTTTTGCAAAATCTACCTGGTGCAGATATTTCTCGTCAGCTAGGGTTCTCTACTCCCCAAATTCCACAGTCAAACAATGTTGCCTTCAATGCGCAGAGGCTACTTCAGACTGCACAGCAACTTGATCACCTTCAGAAGCTACCGTCAACATCTGGCACATTGGGAACAATCATGCAGCCACAGCAGCAGTTTGGGGATATCACTCAACAACCTAGGCAGAACTTGGGAAATCAAACTCTTCCACAGAGTCAAGTTCAGGCCCAGCTCTTGCATCCCCAGAATCTTGTCCAAACCAGCAATGTTCTTCAACAGCAGCAGCCATCCATTCAAAACCATCAACTCCATAGAAGTCTCTCTCAGAACCCTCCACAGCAGCAGCAGCAGCAGCAACAGCAACAACAGACAATTATGGGTCAGAATCAACAGCAAAATTTGGTCCAACCTCCTATGTCTGATCATGTTCAACCATTGCAGATGTCTGATAACCAGATTCAGCTTCAGTTGTTACAAAAGCTTCAGCAGCAACAAACTTTATTGGCACAGCAGTCTGCACTGCAGCAGCCTTCTCAGCTTGCTCAAATCCAAGATCAGCAGCAGAGGCAGCTTTTAGATGCATCCCAGAGCTTCTCTAGGACACTAGCGTCTGGTCAAGTGCTGGAAATTCCTCCTGTTCTTCAAAATTCACTCTCTGATGGTAGTTCTATCACACATCAGATGGCAAAGGCTAATGGTCGAAACAGTATTCAGTTCTCTCATCTTCCTCAGCAGCCAAAGCTTCAGCAGCAGCAACCTTGCTTGCTGCCTGAAATATCTGGTCACATGGCGCTTCCGTCTGTCCCCACTACCAACCAGCCCTCTGCTGCAGGAAGTAGTATACTGACCGGAGCTGCTGGTGCAGGGCAATCTGTAATTACTGATGATGTTCCATCTTGTTCCACCTCACCTTCAACAAATAACTGTGCCAGTGCAGTTCCATCATTGATAAATTCCCGAATCCATAGAAGTGCAGTAACTGGGGATGACATGGCTCAGTCTGCTGCCACTATATTGAGTTCAGGTGCATTAGAAACCATGTCATCAAATGCAAACATGGTAAAAGATTTACAGCCCAAGTCTGAAGTCAAGCCTTCTTTGAACATATCCAAAAGTCAGAGTCAAGGGAATTTTGCTCCTCAACCATACTTGAATGGTGGTGCGGCCCAGACAGATTATTTGGATACATCATCTTCTACATCAGTTTGCCTATCTCAGGGTGATGCTCACATGCATCAGAATAACAACCCATTATCTTACAATCCACAATCTATGTATTTTAGAGGCAATAGTCAAGATGGGGATGTTCAGGCAGATGCTAGGAGCCATGTTCCGTACAGCAGTAACATTGATAGCCAAATGGGAATGCCACTGAATCCAGATTCCCTTTTAACAAAAGGCACATTGGGGCAGGGGAAGGATTTGTCTAATAATTTCGCTTCAGGAGGCATGCTTGGAAACTATGAAAATAACAGAGATGCTCAGCAGGAACTTTCATCGTCAATGGTTTCACAGACATTTGGAGTCCCTGATATGACCTTTAATTCTATTGATTCAACAATAGATGATAGTAGCTTCCTGGATAGGGGTGCATGGGCTCCTCCACCACCGCCACCTGCACTGCCTCCACCACAGTTTCAGCGCATGAGGACATATACCAAGGTTTATAAACGTGGAGCTGTTGGAAGGTCCATAGACATTACGCGGTATTCTGGTTATGAGGAGCTTAAACAGGATCTAGCTCGTAGATTTGGCATAGAGGGCCAGCTAGAGGACCGACAAAGGATAGGCTGGAAACTTGTCTATGTAGATCATGAAAATGACGTTCTACTTGTGGGAGACGACCCTTGGGAGGAGTTTGTTAACTGTGTCCGCTGTATCAAAATACTCTCTCCGCAAGAAGTGCAACAGATGAGCTTGGACGGAGATTTCAATGGCGGGCTTCCAAACCAAGCCTGTAGCAGCTCTGACGGTGGGAATACTTAA 3366 0.4661 MKTHPDGTAAAASAASNPAEEKKSINPKLWQACAGPLVNLPPAGTHVIYFPQGHSEQVAASLKKDADAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLALKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFFNPRASPSEFVIPLAKYYKAVYSHQISAGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRAKRPRQPGMPDDDPSDFENLFKRTMPWLGDDMCMKDPQGLPGLSLVQWMNMQQNPAMANSLQTNYMPSLSGSVLQNLPGADISRQLGFSTPQIPQSNNVAFNAQRLLQTAQQLDHLQKLPSTSGTLGTIMQPQQQFGDITQQPRQNLGNQTLPQSQVQAQLLHPQNLVQTSNVLQQQQPSIQNHQLHRSLSQNPPQQQQQQQQQQQTIMGQNQQQNLVQPPMSDHVQPLQMSDNQIQLQLLQKLQQQQTLLAQQSALQQPSQLAQIQDQQQRQLLDASQSFSRTLASGQVLEIPPVLQNSLSDGSSITHQMAKANGRNSIQFSHLPQQPKLQQQQPCLLPEISGHMALPSVPTTNQPSAAGSSILTGAAGAGQSVITDDVPSCSTSPSTNNCASAVPSLINSRIHRSAVTGDDMAQSAATILSSGALETMSSNANMVKDLQPKSEVKPSLNISKSQSQGNFAPQPYLNGGAAQTDYLDTSSSTSVCLSQGDAHMHQNNNPLSYNPQSMYFRGNSQDGDVQADARSHVPYSSNIDSQMGMPLNPDSLLTKGTLGQGKDLSNNFASGGMLGNYENNRDAQQELSSSMVSQTFGVPDMTFNSIDSTIDDSSFLDRGAWAPPPPPPALPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFNGGLPNQACSSSDGGNT* 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3250 1121 MobiDBLite consensus disorder prediction 867 897 - -
Aev05g3250 1121 Gene3D - 130 233 IPR015300 -
Aev05g3250 1121 SUPERFAMILY CAD & PB1 domains 1023 1088 - -
Aev05g3250 1121 MobiDBLite consensus disorder prediction 823 841 - -
Aev05g3250 1121 SUPERFAMILY DNA-binding pseudobarrel domain 121 261 IPR015300 -
Aev05g3250 1121 MobiDBLite consensus disorder prediction 819 844 - -
Aev05g3250 1121 ProSiteProfiles PB1 domain profile. 1010 1094 IPR000270 GO:0005515
Aev05g3250 1121 MobiDBLite consensus disorder prediction 552 588 - -
Aev05g3250 1121 MobiDBLite consensus disorder prediction 986 1005 - -
Aev05g3250 1121 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
Aev05g3250 1121 PANTHER AUXIN RESPONSE FACTOR 14 1113 - -
Aev05g3250 1121 MobiDBLite consensus disorder prediction 1 23 - -
Aev05g3250 1121 MobiDBLite consensus disorder prediction 991 1005 - -
Aev05g3250 1121 Gene3D - 1005 1099 - -
Aev05g3250 1121 Pfam Auxin response factor 258 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev05g3250 1121 Pfam AUX/IAA family 1010 1095 IPR033389 -
Aev05g3250 1121 Gene3D - 296 367 - -
Aev05g3250 1121 CDD B3_DNA 131 223 IPR003340 GO:0003677
Aev05g3250 1121 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 1113 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev05g3250 1121 Pfam B3 DNA binding domain 132 233 IPR003340 GO:0003677
Aev05g3250 1121 SMART B3_2 132 234 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3250 Aev-Chr5 32328180 32333946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3250 17 481 B3 DNA Binding Superfamily AT5G20730 69.748 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev05g3250 B3 1.7e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3250 - - ccaj:109803454 1813.89