Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3221 ATGATATCCGTCTCTCTCTTTCCTCTTCATTATTTTTTTTTCTCTCTTTCCTCTCTCTTTCTCTCTTGCACATACAAAAGAATGGACAAAAAACCGTGCAATTCATCATCTCAAGATCCTGAAGTGAGAAAGGGGCCATGGACCATGGAAGAAGATTTGATCTTGATCAACTATATTGCAAATCATGGTGAAGGTGTTTGGAACTCCTTAGCCAAAGCTGCAGGTCTTAAACGTACCGGAAAGAGTTGTAGACTAAGGTGGCTAAATTACCTTCGTCCCGATGTTAGAAGAGGGAATATTACGGCTGAAGAACAACTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAATAGGTGGTCCAAAATAGCAAAACACCTTCCTGGTAGAACTGACAATGAGATAAAGAACTTCTGGAGGACAAGGATTCAAAAACACATAAAGCAAGCAGAGAGCTTCCAACAACAACAGCAGCAACAACAACAACAGAGTAGTAATAATTCATCGTCTCATGAAATGATGAACGACCACCACCACCACCACGGCCACGGCGGAAGCAGTAGCCAAGTTTCAAACATGGTGAATGAGCCAATGGAGACCTATTCTCCTCCCTCTTACCATCATCACCAAGGGAACTTGGAGCCATTCCCAACTCATCATCATCATCAGTACCCCACAATTCCTGATCAATCTAGTTGTTGTACCAATGACAACAACTATTGGAACATGGAGGATATCTGGTCCATGCAATTACTCAATGGAGATTAA 765 0.4209 MISVSLFPLHYFFFSLSSLFLSCTYKRMDKKPCNSSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITAEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAESFQQQQQQQQQQSSNNSSSHEMMNDHHHHHGHGGSSSQVSNMVNEPMETYSPPSYHHHQGNLEPFPTHHHHQYPTIPDQSSCCTNDNNYWNMEDIWSMQLLNGD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3221 254 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 28 251 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev05g3221 254 MobiDBLite consensus disorder prediction 147 170 - -
Aev05g3221 254 SUPERFAMILY Homeodomain-like 41 138 IPR009057 -
Aev05g3221 254 Coils Coil 142 162 - -
Aev05g3221 254 CDD SANT 101 140 IPR001005 -
Aev05g3221 254 SMART sant 43 93 IPR001005 -
Aev05g3221 254 SMART sant 96 144 IPR001005 -
Aev05g3221 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 91 IPR017930 -
Aev05g3221 254 CDD SANT 46 91 IPR001005 -
Aev05g3221 254 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Aev05g3221 254 Pfam Myb-like DNA-binding domain 97 140 IPR001005 -
Aev05g3221 254 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Aev05g3221 254 MobiDBLite consensus disorder prediction 184 198 - -
Aev05g3221 254 Gene3D - 44 96 - -
Aev05g3221 254 MobiDBLite consensus disorder prediction 147 228 - -
Aev05g3221 254 Gene3D - 101 174 - -
Aev05g3221 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 146 IPR017930 -
Aev05g3221 254 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 28 251 - -
Aev05g3221 254 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3221 Aev-Chr5 32071007 32074764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3221 21 254 MYB Transcription Factor Family AT3G01530 53.165 2.18e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3221 Myb_DNA-binding 9.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3221 K09422 - gmx:778046 328.946