Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3217 ATGAATTCTATTGCTATTTCCCTTGAGATGGCTGCCACAGCAACTGCATCTTCTGTTGGTCCGCGATATGCACCACCCGACCCGACCCTGCCTAAGCCATGGAGGGGTCTTGTGGATGGCAAGACTGGGTATCTCTACTTTTGGAATCCTGAGACTAATGTCACCCAGTACGAGAGGCCTTCGAGCTCATCCGCACCACCAAAGTCTTCTTCTGTGCCTAGCTCGTCTGTCCAGGTTCAACAATCATCTCAAGGGTCACAGCGTGGTCACAGTCCCGACATGAATGATAGGTACGGTAGAAACGGTGGGGGTGGATCAAACAACGAAGGTGGATCACGGAGCTATCAGGGTTCGAAAGGTGGGAATTCTAGTTCTCATAACGTTCCAAATGGGATGCATTCTGCTGGAAATGTTAGTTCTTCCGTCAGAGGTGTTGGAGCATCAGATACTGGAGCTGGATTATCTCCAGAGGCTTATCGACGCCGGCATGAAATAACTATTACTGGAGATAATGTGCCTCCACCTCTTACATCATTTGGGTCAACTGGCTTTCCATCTGAGATTCTGAGAGAGGTGCAAAATGCTGGGTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCGATTGCTCTTCAAAGTAAAGATATTGTTGCCATTGCCAAAACAGGTTCAGGGAAGACATTGGGGTATTTAATCCCAGCATTCATTCACCTCAAGCGCAGTAGTAACAACTCTAAAATGGGCCCCTCTGTGTTGGTTCTGGCCCCAACAAGGGAGCTGGCAACACAGATTCAAGATGAAGCTGTGAAGTTCGGGAAATCATCCCGTATTTCTTGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAAGTGAGAGAAGTTGATAGTGGAGTAGATATCGTGGTAGCCACTCCTGGCCGCTTGAATGATATTCTTGAGATGAGGAGGAATCTTCTTCACCAGATCTCTTACCTTGTGCTGGATGAGGCCGACAGGATGCTTGACATGGGTTTTGAACCTCAAATTAGGAAGATTGTTAATGAGGTGCCTACTCGCAGGCAAACTCTCATGTTCACTGCAACATGGCCCAAGGAGGTTAGGAAAATTGCTGCTGATCTGCTGGTCAATCCTGTCCAGGTGAACATTGGCAATGTAGATGAGCTTGTTGCTAACAAGTCAATTACTCAGCATGTTGAAGTATTGCCCCCAATGGAGAAACAAAGAAGACTAGAACATATTTTGCGGTCACAGGATCAAGGATCAAAAATAATTATTTTTTGTTCTACCAAGAAAATGTGTGATCAACTTGCGCGCAATCTTACACGACAATTTGGCGCCGCAGCTATTCACGGTGATAAATCCCAGTCTGAGAGGGACCATGTCTTGAACCAGTTTCGAACTGGGAGGTCTCCTGTGCTTGTAGCCACAGATGTTGCAGCTCGAGGACTGGACATCAAAGACATTAGGGTGGTTGTCAACTATGACTTCCCTACAGGAGTGGAAGATTATGTTCATAGGATTGGAAGGACCGGGAGGGCTGGAGCCACTGGTATAGCTTACACTTTCTTTGCGGAGCAGGATGCTAAATATGCTTCAGATCTCATCAAAGTCTTGGAAGGTGCAAACCAACGAGTTCCTCCAGAAATTCGTGATATGGCATCACGGAGTGGTGGTGGGATGGGCAGATCCAGACGATGGGGCCCTACTGGCCGTGGAGGACGTGGTGACTCAGGATATGGTGGAAGGAATAATGACACTGGTTATGGTGGAAGGGGCAGTGATGCTGGATATGGTGGAAGGGGCAGCGATTCTAGTTATGGAGGAAGGGGTGGGTGGAGTTCTGGTGCTTCTGGCAGAGGTGGAGGCCGTGGATCAGACTATGATTCACAGAGGAATGATCGTGGTCGAAGTCCTGACAGGGGATCAAGTTGGAGTGACCGCTTCAAAAATCGTGATCGTAGCCGAAGCCGTAGTCGCAGTCCAGGGAGGGCTGCACCATATCAACACTCCCAAGGCAGCTTTCACAAAGCAATGATGGAACGTGGAGGAGGGGATATTGATCGCAACAAGAGCTACAATCGGGACCGAAGTCGCAGTCGTAGCCCACACAATAAGGAGAGGGCTCCAGCAGCTCGGGAACGTTCCCCACCTTACAGTTTTCATCGATCGATGATGGGACAGGGCCAATCATCCCCTCCATCTCAACGGCAGCGTGGAGATGAAAAAAGCTCTAGATACGGGCACAGTCCTCACCGAAGTCCCCCATCCTCCGCCGGTGGTGTTAGATCCAACAGTAGTCCTAAAAAAGAGTGGGGAGGTCCTTCAGGTGATGGAAGATACGGTGGGTCACATGCTTCTTTCAATGGAGAAGAGGAGGAAGGGATGATTCCTGATGAAGAAGGCATGATACCTCAAGATGATGAATGA 2433 0.4903 MNSIAISLEMAATATASSVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSAPPKSSSVPSSSVQVQQSSQGSQRGHSPDMNDRYGRNGGGGSNNEGGSRSYQGSKGGNSSSHNVPNGMHSAGNVSSSVRGVGASDTGAGLSPEAYRRRHEITITGDNVPPPLTSFGSTGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLIPAFIHLKRSSNNSKMGPSVLVLAPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQVREVDSGVDIVVATPGRLNDILEMRRNLLHQISYLVLDEADRMLDMGFEPQIRKIVNEVPTRRQTLMFTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGIAYTFFAEQDAKYASDLIKVLEGANQRVPPEIRDMASRSGGGMGRSRRWGPTGRGGRGDSGYGGRNNDTGYGGRGSDAGYGGRGSDSSYGGRGGWSSGASGRGGGRGSDYDSQRNDRGRSPDRGSSWSDRFKNRDRSRSRSRSPGRAAPYQHSQGSFHKAMMERGGGDIDRNKSYNRDRSRSRSPHNKERAPAARERSPPYSFHRSMMGQGQSSPPSQRQRGDEKSSRYGHSPHRSPPSSAGGVRSNSSPKKEWGGPSGDGRYGGSHASFNGEEEEGMIPDEEGMIPQDDE* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3217 810 Gene3D - 20 67 - -
Aev05g3217 810 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 140 650 - -
Aev05g3217 810 ProSitePatterns WW/rsp5/WWP domain signature. 34 60 IPR001202 GO:0005515
Aev05g3217 810 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 177 205 IPR014014 GO:0003724
Aev05g3217 810 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 208 382 IPR014001 -
Aev05g3217 810 SMART helicmild6 436 516 IPR001650 -
Aev05g3217 810 MobiDBLite consensus disorder prediction 16 35 - -
Aev05g3217 810 Gene3D - 387 558 IPR027417 -
Aev05g3217 810 MobiDBLite consensus disorder prediction 628 661 - -
Aev05g3217 810 MobiDBLite consensus disorder prediction 682 714 - -
Aev05g3217 810 MobiDBLite consensus disorder prediction 56 157 - -
Aev05g3217 810 MobiDBLite consensus disorder prediction 794 810 - -
Aev05g3217 810 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 328 336 IPR000629 -
Aev05g3217 810 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 40 140 650 - -
Aev05g3217 810 SMART ww_5 29 62 IPR001202 GO:0005515
Aev05g3217 810 Pfam Helicase conserved C-terminal domain 408 516 IPR001650 -
Aev05g3217 810 MobiDBLite consensus disorder prediction 758 772 - -
Aev05g3217 810 Gene3D - 154 386 IPR027417 -
Aev05g3217 810 SUPERFAMILY WW domain 22 61 IPR036020 GO:0005515
Aev05g3217 810 MobiDBLite consensus disorder prediction 548 810 - -
Aev05g3217 810 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 411 555 IPR001650 -
Aev05g3217 810 ProSiteProfiles WW/rsp5/WWP domain profile. 28 62 IPR001202 GO:0005515
Aev05g3217 810 CDD SF2_C_DEAD 396 525 - -
Aev05g3217 810 Pfam DEAD/DEAH box helicase 201 371 IPR011545 GO:0003676|GO:0005524
Aev05g3217 810 MobiDBLite consensus disorder prediction 101 146 - -
Aev05g3217 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 533 IPR027417 -
Aev05g3217 810 SMART ultradead3 196 399 IPR014001 -
Aev05g3217 810 MobiDBLite consensus disorder prediction 56 91 - -
Aev05g3217 810 MobiDBLite consensus disorder prediction 724 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3217 Aev-Chr5 32032353 32036998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3217 175 554 Eukaryotic Initiation Factors Gene Family AT3G19760 33.681 1.27e-64 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3217 K12823 - gmx:100786511 1109.36