Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3215 ATGCTGCTGATAATGGCACACCAACAACTTGGAAACAAATGGGCAAAGATTTCCAGGAGAATTCCGGGAAGGCCAGAGAACTCCGTCAAGAACCATTGGAACGCCACCAAACGCCGCCGTAGCAAGAAGCTTCCAATCTACATGGTCAACAACATGTGTACCGACGTCTCTGATGGCTCTATGCTTCGAGCATACATCAAAAGCCTTACACCAAAAACAACAAAAGCTCCTCCTTCTCCTCCGCCTCCGCCTCCGCCTCCGCTGCAAGACGAAGCAGCACCAGCAGCAGCAAATAACCATAATAATGGTGCATTGAATGATGACGATATTGATCTCATGGATTGGGTTGCCGAGTTGCTTGCTGGTGATGCATCCGTCAACGCTGGATACTTTGACTTTTGA 402 0.4876 MLLIMAHQQLGNKWAKISRRIPGRPENSVKNHWNATKRRRSKKLPIYMVNNMCTDVSDGSMLRAYIKSLTPKTTKAPPSPPPPPPPPLQDEAAPAAANNHNNGALNDDDIDLMDWVAELLAGDASVNAGYFDF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3215 133 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Aev05g3215 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Aev05g3215 133 MobiDBLite consensus disorder prediction 67 108 - -
Aev05g3215 133 MobiDBLite consensus disorder prediction 74 91 - -
Aev05g3215 133 CDD SANT 2 37 IPR001005 -
Aev05g3215 133 PANTHER TRANSCRIPTION FACTOR MYB98 1 102 - -
Aev05g3215 133 PANTHER MYB PROTEIN-RELATED 1 102 - -
Aev05g3215 133 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Aev05g3215 133 Gene3D - 1 52 - -
Aev05g3215 133 SMART sant 1 39 IPR001005 -
Aev05g3215 133 Pfam Myb-like DNA-binding domain 2 34 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3215 Aev-Chr5 32024773 32025174 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3215 2 69 MYB Transcription Factor Family AT5G58850 45.333 4.26e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3215 Myb_DNA-binding 3.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3215 K09422 - jre:108992800 81.2629