Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3210 ATGCCTTCTTCCTCTTCATTTCACCCTCCACAGTCGCCGTCGCCGCCACCGGTTTACTGCCGAATTAATTTTGGCGTTGAACATGATCAAATGGGCGAAGTGTGTCCTCTAATTTCATGGTTCCAGAGACGCAACCAGGATGGTGGAAGCAGCAGATCAGGGCATATACATAGCCCAAACCTACCCATACAAGAACAATTCCAACCGAATTATTACTATACCCCTCCTTTCTATAACAACATCTCATCAACCCCTAATTATTTGGGCCAATCTTCCTTTGTCAGTCAAGATCCCATCAACCCAGCAATTGTTACCGCAATTGCACCACAAAACACTAGTGCTTCTTCTCTCCATGCACTCTATAACATCAACAACAACAACAGTAGCCACCACATCATGTTCGATTACTCTTTTCCTCCATATACTATACCTACTCTGCCAACTCATCATCATCATGATTTTCTTGCTACTATCCCTTCTTCCTCCTCTTTATCCTCCTCTTCATCTTCATTTCGCCATCCACCACCAGCTCCCCTCCCACCACCACCATCACCACCGCCACCGCCGCAGCCGCAGCCGGTTTTGGATGGAAACGATCGAGTGGGTCGTGGTGCGGTGAGGAGACGACAACACACAAGGGTAGAGGTAGAGGTAGAGGAAGGCGAAGAAATCACCTGCGTCAGAGGCCAATGGTCTCCGCAAGAAGACAGTATTCTGACGAGATTGGTAGGAGATGGTAGGAAGAAGAAATGGAGTGTCATTGCGAGGAGGATGAAAGGAAGGAGCTCAAAGCAATGTCGAGAGAGATGGTACAACCATCTTTGCCCTTTCATTAAGAAAGGGGCATGGTCAGAAACGGAAGACATGCTGCTGATAATGGCACACCAACAACTTGGAAACAAATGGGCAAAGATTTCAGGAGAATTCCGGGAAGGCCAGAGAACTCCGTCAAGAACCATTGGAACGCACCAAAACGCCGCCGTAGCAAGAAGCTTCCAATCTACATGGTCAACAACATGTGTACCGACGTCTCTGATGGCTCTATGCTTCGAGCATACATCAAAAGCCTTACACCAAAAACAACAAAAAGCTCCTCCTTCTCCTCCGCCTCCGCCTCCGCTGCAAGACGAAGCACTACCAGCAACAGCAAATAACCATAATAATGGTGCATTGAATGATGACGATATTGATCTCATGGATTGGGTTGCCGAGTTGCTTGCTGGTGATGCATCCGTCAACGCTGGATACTTTGACTTTTGA 1260 0.4762 MPSSSSFHPPQSPSPPPVYCRINFGVEHDQMGEVCPLISWFQRRNQDGGSSRSGHIHSPNLPIQEQFQPNYYYTPPFYNNISSTPNYLGQSSFVSQDPINPAIVTAIAPQNTSASSLHALYNINNNNSSHHIMFDYSFPPYTIPTLPTHHHHDFLATIPSSSSLSSSSSSFRHPPPAPLPPPPSPPPPPQPQPVLDGNDRVGRGAVRRRQHTRVEVEVEEGEEITCVRGQWSPQEDSILTRLVGDGRKKKWSVIARRMKGRSSKQCRERWYNHLCPFIKKGAWSETEDMLLIMAHQQLGNKWAKISGEFREGQRTPSRTIGTHQNAAVARSFQSTWSTTCVPTSLMALCFEHTSKALHQKQQKAPPSPPPPPPLQDEALPATANNHNNGALNDDDIDLMDWVAELLAGDASVNAGYFDF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3210 419 MobiDBLite consensus disorder prediction 357 390 - -
Aev05g3210 419 Gene3D - 279 340 - -
Aev05g3210 419 Pfam Myb-like DNA-binding domain 231 291 - -
Aev05g3210 419 CDD SANT 282 317 IPR001005 -
Aev05g3210 419 MobiDBLite consensus disorder prediction 363 377 - -
Aev05g3210 419 CDD SANT 231 274 IPR001005 -
Aev05g3210 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 306 IPR017930 -
Aev05g3210 419 ProSiteProfiles Myb-like domain profile. 275 319 IPR001005 -
Aev05g3210 419 SUPERFAMILY Homeodomain-like 227 309 IPR009057 -
Aev05g3210 419 Gene3D - 227 278 - -
Aev05g3210 419 MobiDBLite consensus disorder prediction 165 200 - -
Aev05g3210 419 PANTHER MYB PROTEIN-RELATED 208 350 - -
Aev05g3210 419 ProSiteProfiles Myb-like domain profile. 228 274 IPR001005 -
Aev05g3210 419 SMART sant 279 338 IPR001005 -
Aev05g3210 419 SMART sant 227 276 IPR001005 -
Aev05g3210 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 278 IPR017930 -
Aev05g3210 419 MobiDBLite consensus disorder prediction 173 194 - -
Aev05g3210 419 PANTHER MYB DOMAIN PROTEIN 100-RELATED 208 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3210 Aev-Chr5 31963858 31967092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3210 219 332 MYB Transcription Factor Family AT4G18770 47.863 5.85e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3210 Myb_DNA-bind_6 5.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3210 K09422 - cit:102611641 121.324