Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3208 ATGCTGCTGATAATGGCACACCAACAACTTGGAAACAAATGGGCAAAGATTTCCAGGAGAATTCCGGGAAGGCCAGAGAACTCCGTCAAGAACCATTGGAACGCCACCAAACGCCGCCGTAGCAAGAAGCTTCCAATCTACATGGTCAACAACATGTGTACCGACGTCTCTGATGGCTCTATGCTTCGAGCATACATCAAAAGCCTTACACCAAAAACAACAAAAGCTCCTCCTTCTCCTCCTCCTCCTCGTCCTCCTCCTTCTCCTCCGCCTCCGCCTCCGCTGCAAGACGAAGCAGCACCAGCAGCAAATAACCATAATAATGGTGCATTGAATGATGACGATATTGATCTCATGGATTGGGTTGCCGAGTTGCTTGCTGGTGATGCATCCGTCAACGCTGGATACTTTGACTTTTGA 420 0.4905 MLLIMAHQQLGNKWAKISRRIPGRPENSVKNHWNATKRRRSKKLPIYMVNNMCTDVSDGSMLRAYIKSLTPKTTKAPPSPPPPRPPPSPPPPPPLQDEAAPAANNHNNGALNDDDIDLMDWVAELLAGDASVNAGYFDF* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3208 139 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Aev05g3208 139 CDD SANT 2 37 IPR001005 -
Aev05g3208 139 Pfam Myb-like DNA-binding domain 2 34 IPR001005 -
Aev05g3208 139 Gene3D - 1 52 - -
Aev05g3208 139 MobiDBLite consensus disorder prediction 74 98 - -
Aev05g3208 139 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Aev05g3208 139 SMART sant 1 39 IPR001005 -
Aev05g3208 139 MobiDBLite consensus disorder prediction 67 114 - -
Aev05g3208 139 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Aev05g3208 139 PANTHER MYB PROTEIN-RELATED 1 120 - -
Aev05g3208 139 PANTHER TRANSCRIPTION FACTOR MYB98 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3208 Aev-Chr5 31959127 31959546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3208 2 69 MYB Transcription Factor Family AT5G58850 45.333 3.80e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3208 Myb_DNA-binding 4.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3208 K09422 - mnt:21403422 81.2629