Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3207 ATGGAGCCTGAGGATCCTTTCTTTTTCTTTCCAGATTTCCCAATCCTTTCCTCCATTCTCCACCCAAACCCCCCACCCATCCCCATCCCCACCCTCACTTCTTTAGATCCAATTCATCTTCCACCGCCGCCACCGCTGCCGCTGCCGCTATCAACACAAGCAGCAAACAGCAGCTACCCGATGCTCCAAATAAGCAACCACCCTGGTTTTGCTTATACCCTTGATCTCGCTAATTCTGCGTCCTCTTCCAGTGTGTCCTCTAATTTCATGGTTCCAGAGACGCAACCAGGATGGTGGGAAGCAGCAGATCAGGGCATATACATAGTCCCAAACCTACCCATACAAGAACAATTCAAACCGAATTATTACTATACCCCTCCTTTCTATAACAACATCTCATCAACCCCTAATTATTTGGGCCAATCTTCCTTTGTCAGTCAAGATCCCATCAACCCAGCAATTGTTACCGCAATTGCACCACAAAACACTAGTGCTTCTTCTCTCCATGCACTCTATAACATCAACAACAACAACAGTAGCCACCACATCATGTTCGATTACTCTTTTCCTCCATATACTATACCTACTCTGCCAACTCATCATCATCATGATTTTCTTGCTACTATCCCTTCTTCCTCCTCTTTATCCTCCTCTTCATCTTCATTTCGCCATCCACCACCAGCTCCCCTCCCACCACCACCACCACCACCGCCACCGCCACCGCCGCAGTCGCAGCCGGAGCCGGTTTTGGATGGAAATGATCGAGTGGGTCGTGGTGCGGTGAGGAGACGACAACGCACAAGGGTAGAGGTAGAGGTTGAGGAAGGCAAAGAAATCACCTGCGTCAGAGGCCAATGGTCTCCGCAAGAAGACAGTATTCTGACGAGATTGGTAGGAGATGGTAGGAAGAAGAAATGGAGTGTCATTGCGAGGAGGATGAAAGGAAGGAGCTCAAAGCAGTATCGAGAGAGATGGAGAATTCCGGGAAGGCCAGAGAACTCCGTCAAGAACCATTGGAACGCCACCAAACGCCGCCGTAGTAAGAAGCTTCCAATCTACATGGTCAACAACATGCGTACCGACGTCTCTGATGGCTCTATGCTTCGAGCATACATCAAAAGCCTTACACCAAAAACAACAAAAGCTCCTCCTCCTCCTCCTCCTTCTCCTCCGCCTCCGCTTCCGCTGCAAGACGAAGCAGCACCAGCACCACCAGCAGCAGCAAATAACCATAATAATGGTGACTTGAATGATGACGATATTGATCTCATGGATTAG 1278 0.4914 MEPEDPFFFFPDFPILSSILHPNPPPIPIPTLTSLDPIHLPPPPPLPLPLSTQAANSSYPMLQISNHPGFAYTLDLANSASSSSVSSNFMVPETQPGWWEAADQGIYIVPNLPIQEQFKPNYYYTPPFYNNISSTPNYLGQSSFVSQDPINPAIVTAIAPQNTSASSLHALYNINNNNSSHHIMFDYSFPPYTIPTLPTHHHHDFLATIPSSSSLSSSSSSFRHPPPAPLPPPPPPPPPPPPQSQPEPVLDGNDRVGRGAVRRRQRTRVEVEVEEGKEITCVRGQWSPQEDSILTRLVGDGRKKKWSVIARRMKGRSSKQYRERWRIPGRPENSVKNHWNATKRRRSKKLPIYMVNNMRTDVSDGSMLRAYIKSLTPKTTKAPPPPPPSPPPPLPLQDEAAPAPPAAANNHNNGDLNDDDIDLMD* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3207 425 SUPERFAMILY Formin homology 2 domain (FH2 domain) 232 241 - -
Aev05g3207 425 MobiDBLite consensus disorder prediction 224 247 - -
Aev05g3207 425 PANTHER MYB PROTEIN-RELATED 264 325 - -
Aev05g3207 425 MobiDBLite consensus disorder prediction 376 425 - -
Aev05g3207 425 SUPERFAMILY Homeodomain-like 283 343 IPR009057 -
Aev05g3207 425 CDD SANT 286 326 IPR001005 -
Aev05g3207 425 Gene3D - 276 327 - -
Aev05g3207 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 278 333 IPR017930 -
Aev05g3207 425 ProSiteProfiles Myb-like domain profile. 283 326 IPR001005 -
Aev05g3207 425 Pfam Myb-like DNA-binding domain 283 326 IPR001005 -
Aev05g3207 425 PANTHER MYB DOMAIN PROTEIN 100-RELATED 326 358 - -
Aev05g3207 425 MobiDBLite consensus disorder prediction 379 400 - -
Aev05g3207 425 SMART sant 282 345 IPR001005 -
Aev05g3207 425 PANTHER MYB DOMAIN PROTEIN 100-RELATED 264 325 - -
Aev05g3207 425 MobiDBLite consensus disorder prediction 214 268 - -
Aev05g3207 425 PANTHER MYB PROTEIN-RELATED 326 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3207 Aev-Chr5 31954455 31956782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3207 242 375 MYB Transcription Factor Family AT5G58850 30.435 5.04e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3207 Myb_DNA-binding 6.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3207 K09422 - jre:108992800 87.0409