Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3204 ATGACGAGATTGGTAGAAAATGGTAGGAAGAAGAAATGGAGTGTCATTGCGAGGAGGATGAAAGGAAGGAGCTCAAAGCAGTGTCGAGAGAGATGGTACAACCATCTTTGCCCTTTCATTAAGAAAGGGGCATGGTCAGAAACGGAAGACATGCTGCTGATAATGGCACACCAACAACTTGGAAACAAATGGGCAAAGATTTCCAGGAGAATTCTGGGAAGGCCAGAGAACTCCGTCAAGAACCATTGGAACGCCACCAAACGCTGCCGTAGCAAGAAGCTTCCAATCTACATGGTCAACAACATGCGTACCGACGTCTGTGATGGCTCTATGCTTCGAGCATACATCAAAAGCCTTACACCAAAAACAACAAAAGCTCCTCCTTCTCCTCCTCCTCCTCCTCCTTCTCCTCCGCTTCCGCCTCCGCCGCAAGACGAACCAGCACCAGCAGCAAATAACCATAATAATGGTGCATTGAATGATGATGATATTGATCTCATGGATTGGGTTGCCGAGTTGCTTGCTGGTGATGCACCCGTCAACGCTGGATACTTTGACTTTTGA 564 0.477 MTRLVENGRKKKWSVIARRMKGRSSKQCRERWYNHLCPFIKKGAWSETEDMLLIMAHQQLGNKWAKISRRILGRPENSVKNHWNATKRCRSKKLPIYMVNNMRTDVCDGSMLRAYIKSLTPKTTKAPPSPPPPPPSPPLPPPPQDEPAPAANNHNNGALNDDDIDLMDWVAELLAGDAPVNAGYFDF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3204 187 Gene3D - 44 100 - -
Aev05g3204 187 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Aev05g3204 187 SUPERFAMILY Homeodomain-like 15 94 IPR009057 -
Aev05g3204 187 MobiDBLite consensus disorder prediction 121 162 - -
Aev05g3204 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Aev05g3204 187 PANTHER MYB PROTEIN-RELATED 3 108 - -
Aev05g3204 187 CDD SANT 44 87 IPR001005 -
Aev05g3204 187 MobiDBLite consensus disorder prediction 124 148 - -
Aev05g3204 187 Pfam Myb-like DNA-binding domain 42 84 IPR001005 -
Aev05g3204 187 Pfam Myb-like DNA-binding domain 8 36 IPR001005 -
Aev05g3204 187 ProSiteProfiles Myb-like domain profile. 1 36 IPR001005 -
Aev05g3204 187 SMART sant 2 38 IPR001005 -
Aev05g3204 187 SMART sant 41 89 IPR001005 -
Aev05g3204 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 91 IPR017930 -
Aev05g3204 187 CDD SANT 10 36 IPR001005 -
Aev05g3204 187 Gene3D - 1 41 - -
Aev05g3204 187 PANTHER TRANSCRIPTION FACTOR MYB98 3 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3204 Aev-Chr5 31944939 31946177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3204 1 119 MYB Transcription Factor Family AT5G11050 46.875 2.66e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3204 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3204 K09422 - cit:102611641 134.035