Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3203 ATGATCCTTTTCAGTAAATCCTTACACCATTTCCCACAGAACCAACAAAATTATCTTTCACTCTCTCACTGTCTGCTTCAAATGACAAAAGAAGCACCCAAAAAAATGACGAAATTGCAATGGAGTTTGGATGAGGACAGTATTCTCAAGGACAAGGTGGCTGAGCTTGGAGATAATCAGTGGAAAAAAATTGCAAAATCAATTAAAGGAAGAGTTGGCAAACAGTGTCGTGAAAGATGGCTCAACCATCTCTCCCCACATATCAAGGATGGGCCATGGACCGAAGAGGAAGATGCAATGCTAATCGAAGCCCACAAAGAGGTTGGGAACAAGTGGAGCAAGATTGCAAAGAAATTGCATGGAAGGCCCGAAAACTCCATCAAGAACCGTTGGAATAGTGTCAAGAGACGCAGGACCACCAATCATCCTGATGGCTCACAACTCCAAGCCTATATCAAGGAAATCAATGGTATGACCCAAGAAAAAGAAGAATCAGAAGAAGAAGAAGAAGAAGAAAAAGCAGAGGAAGAAGAAGAAGCAGAGGAAGTAGCACCAGAGAAAGGAAATCTGAACCTTGTTGGTGAGGCCAACAATATGCCATTGGACCATTGTGATGATGATGACATTAGTTTTATGATTCGTTCGGTCTTCCCCAAGTTTGACTTTAGCAGTGAGAATTGGATGTTCAATTTATTGAACTCACCAATGGATTCTGATTTGAATCTCTTGCTGTAA 735 0.4136 MILFSKSLHHFPQNQQNYLSLSHCLLQMTKEAPKKMTKLQWSLDEDSILKDKVAELGDNQWKKIAKSIKGRVGKQCRERWLNHLSPHIKDGPWTEEEDAMLIEAHKEVGNKWSKIAKKLHGRPENSIKNRWNSVKRRRTTNHPDGSQLQAYIKEINGMTQEKEESEEEEEEEKAEEEEEAEEVAPEKGNLNLVGEANNMPLDHCDDDDISFMIRSVFPKFDFSSENWMFNLLNSPMDSDLNLLL* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3203 244 Gene3D - 29 90 - -
Aev05g3203 244 CDD SANT 41 84 IPR001005 -
Aev05g3203 244 Coils Coil 148 184 - -
Aev05g3203 244 PANTHER MYB DOMAIN PROTEIN 100-RELATED 30 180 - -
Aev05g3203 244 MobiDBLite consensus disorder prediction 123 193 - -
Aev05g3203 244 CDD SANT 92 135 IPR001005 -
Aev05g3203 244 MobiDBLite consensus disorder prediction 161 183 - -
Aev05g3203 244 Gene3D - 92 142 - -
Aev05g3203 244 PANTHER MYB PROTEIN-RELATED 30 180 - -
Aev05g3203 244 MobiDBLite consensus disorder prediction 123 142 - -
Aev05g3203 244 SMART sant 37 86 IPR001005 -
Aev05g3203 244 SMART sant 89 137 IPR001005 -
Aev05g3203 244 SUPERFAMILY Homeodomain-like 37 131 IPR009057 -
Aev05g3203 244 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Aev05g3203 244 Pfam Myb-like DNA-binding domain 39 84 IPR001005 -
Aev05g3203 244 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Aev05g3203 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 84 IPR017930 -
Aev05g3203 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Aev05g3203 244 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3203 Aev-Chr5 31936434 31939008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3203 36 156 MYB Transcription Factor Family AT4G18770 52.756 5.16e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3203 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3203 K09422 - pop:18099236 154.066