Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3188 ATGATGGCATCTTCTAGCTACTCAAATTCACCATGTGCAGCCTGCAAATTCCTGAGAAGGAAATGCTTGCCAGATTGCATATTTGCCCCATACTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTGCACAAAATATTTGGTGCAAGCAATGTGAGCAAGCTCCTAAATGAGGTGCTCCCACATCAAAGGGAAGATGCTGTGAACTCCTTGGCCTATGAAGCTGAGGCAAGGATTAAGGATCCTGTGTATGGTTGTGTTGGGGCCATTTCAGTGCTCCAAAGGCAAGTTATTAGGCTCCAAAAGGAACTTGATGCCACCAATGCTGATTTGATGAGATATTGTAATGAAGTTCCTAATAACAATAATCAATCTGGTGGTGGGAGAAGGAATAATCATCTAATGGGTGGTGATGGAGGAGGAAGTTCTCATCATCATCATGGTAATTTTAATTATTATCATTCTAATTGGAATAATGATAATAATGCTTCTGGGGATGGTAGTGGATACCATAGAGGTGATAACAATATGTGA 534 0.412 MMASSSYSNSPCAACKFLRRKCLPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLMRYCNEVPNNNNQSGGGRRNNHLMGGDGGGSSHHHHGNFNYYHSNWNNDNNASGDGSGYHRGDNNM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3188 177 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Aev05g3188 177 MobiDBLite consensus disorder prediction 119 147 - -
Aev05g3188 177 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Aev05g3188 177 Coils Coil 90 117 - -
Aev05g3188 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 166 - -
Aev05g3188 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 2 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3188 Aev-Chr5 31838849 31839382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3188 5 130 AS2 family AT3G27650 78.571 1.62e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev05g3188 LOB 9.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3188 - - var:108328620 243.817