Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3165 ATGCCACTGTCTCGCTCGGTTTTCGAAAAGACAATGGACTTTAATGCTATGGTCTTTACTCCGAACCAAAGGTTCGGAGTCACCGAGTCAATAGTAGGGTCCTCCCGAACCACAGTTTCTCTGACTATAAATCCTTCCTTGTGTGTCTTAGATTTTCATTGTTTCACCATTTTTGGCAACTCTTCTTCCTTAGATTCAATCATGGCTAGGAGCTGGATTATTGACATTGGAGGATTGGCAAAGAAAGTGAAGAATACTAGGCCGTCACCGACCGATGAAATCAAGGACTGTGGAGCATATTGTGAATGTCCAAAATGCCATTATCATATTGATAACAGTGATGTTTCTCCTGAGTGGCCTGGCTTTCCTGCTGGTGTAAAGTTTGATCCTTCTGATGTTGAACTCTTGGAACATCTAGCAGCAAAATGTTGTGTTGGGAACAAAGAGCCACACGTGTTTATCGATGAGTTCATCCCAACTCTTGAAGGAGATCAAGGAATTTGCTACACTCATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGGGAATCGTTCATTTCTTTCACAGGACAGTTCATGCATATGCTACTGGACAGCGAAAGCGTCGAAAGATCCATCATCAACAAGGCTTGAATGAGGAGGAGCATGTGCGCTGGCATAAGACCGGTAAGACCAAAGCTATAACAGAAGATGGAGTGCATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGAACCAAGAAAGGGACCAAGCCATACAAATCCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGGCGAATACGTGGTTTCAAAAGTATTTTATCAACAGCAGAAGCAGGGTGAGAAAGTTGAGGAGAAAGCAGTAGTTGAGGATCCAAGAACACCTAAGCCGAATCCTCCAAATCGACCTTGTGCAGGCAAATATGTTGACTGTGATGACTATTTTGATGAAAATGGCCTTATGTTATTAACTGAGGATGGCAAGCCTATAATCGAAGAGCCACACGCCCCACCATCTAATGTTCAGGATGATGACAATGGAGGCAACCTTACATGGCTGGCCGGCGAATCACAGGCTGTTGATAACAACTCTGACTTTGATGGATTGGAATTGGATGATATATTATTATGCAAAGAGATGTATGATTCTTCTGCTAAAGTAAATGATTCTGGTTTGAAGTCCAACACTTTCAATGGCTTTGCTTGCAATGCAAGCGAATTCGCCGCAAATGATAATGCTTCTTCTTATGGAATTTCTGTCCTGGATACCCTGCAATTGGATACTCCTCCAGATTTTGATCTTTCTAATTTGCAATATTGTTCTCAAGACAGTATACTTCAGTGGATGGACAAGTTATAG 1386 0.4206 MPLSRSVFEKTMDFNAMVFTPNQRFGVTESIVGSSRTTVSLTINPSLCVLDFHCFTIFGNSSSLDSIMARSWIIDIGGLAKKVKNTRPSPTDEIKDCGAYCECPKCHYHIDNSDVSPEWPGFPAGVKFDPSDVELLEHLAAKCCVGNKEPHVFIDEFIPTLEGDQGICYTHPENLPGAKKDGGIVHFFHRTVHAYATGQRKRRKIHHQQGLNEEEHVRWHKTGKTKAITEDGVHKGFKKIMVLYIRTKKGTKPYKSNWVMHQYHLGSEEDEKDGEYVVSKVFYQQQKQGEKVEEKAVVEDPRTPKPNPPNRPCAGKYVDCDDYFDENGLMLLTEDGKPIIEEPHAPPSNVQDDDNGGNLTWLAGESQAVDNNSDFDGLELDDILLCKEMYDSSAKVNDSGLKSNTFNGFACNASEFAANDNASSYGISVLDTLQLDTPPDFDLSNLQYCSQDSILQWMDKL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3165 461 MobiDBLite consensus disorder prediction 289 316 - -
Aev05g3165 461 Gene3D NAC domain 131 289 IPR036093 GO:0003677|GO:0006355
Aev05g3165 461 ProSiteProfiles NAC domain profile. 122 284 IPR003441 GO:0003677|GO:0006355
Aev05g3165 461 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 68 459 IPR044799 GO:0003700
Aev05g3165 461 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 68 459 - -
Aev05g3165 461 SUPERFAMILY NAC domain 106 284 IPR036093 GO:0003677|GO:0006355
Aev05g3165 461 Pfam No apical meristem (NAM) protein 123 265 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3165 Aev-Chr5 31645859 31649622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3165 103 286 NAC Transcription Factor Family AT1G28470 58.421 1.09e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g3165 NAM 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3165 - - gmx:100780662 565.844