Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3158 ATGACAAACAAATTGCCCAATGAACTCCAATTAGGGTTACATTGCAAAGACAAGAACCACGATCTTGGGCCTCAGAATCTTGTATTCAACCAAAGTTGGAGTTTCAAGTTTCATAAGAATTTGATTACCGATGCAACGTTGTACTTTTGTGAGTTTTATTGGCTCGGTGGGGACGAACGGTTCGATATCTACGATGAAGAGAGAGACAAGGCTCTTGGTGATTTTCAGCCGTGGGATATTCTCGAAACTGGTCCATGTAGGAATCGGTGGGACACAGGCTCACGCCAATGCTTCAATTGGAAAAGGACCAACGTTGATGCTAGTAATAATACTATTATTGATGGGGTGTGA 351 0.4245 MTNKLPNELQLGLHCKDKNHDLGPQNLVFNQSWSFKFHKNLITDATLYFCEFYWLGGDERFDIYDEERDKALGDFQPWDILETGPCRNRWDTGSRQCFNWKRTNVDASNNTIIDGV* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3158 116 PANTHER - 1 100 IPR010264 -
Aev05g3158 116 Pfam Plant self-incompatibility protein S1 2 100 IPR010264 -
Aev05g3158 116 PANTHER S-PROTEIN HOMOLOG 18-RELATED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3158 Aev-Chr5 31616596 31616946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3158 1 87 Carbohydrate Esterase AT3G16970 39.560 3.87e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3158 - - pvu:PHAVU_004G003100g 114.775