Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3156 ATGATTTCCATCTCTAAATTCGTTTTACCAATCTTTGCACTAATCATAGTTATAGCTCTGAATTTGAATGGCTGTGAAGCAGGGTGGTTCGGCCCAGATTTAACTGTTCAGATAACAAACACATTACCAAATGGTCTCTGGCTAGGTCTTCATTGCAAGGACAAGAACCATGATCTTGGGCCTCAAGAACTTCAGCCCAATCAAAGTTGGAGCTTCAAGTTCACGGCCAATTTTTTTTTGCATAGGATTCTTTACTTTTGCCATTTTACTTGGAATAAAGGAGATCATTGGTTTGATATTTATAAAGATGAGAGAGACGGTCCTATTGATACTGACTTGTATGCTTGGGATATTGTTCCCACGGGTGCTTGTAGGTTTTTGGACAATGGCAAGGTTCGTCAATGCATAGATTGGAATGATGGCAAAAGTGGAGAGAAACAACAAATTGGTCATGAAAATACTTCTGCTACTACTATTGTGGTGTAA 486 0.3889 MISISKFVLPIFALIIVIALNLNGCEAGWFGPDLTVQITNTLPNGLWLGLHCKDKNHDLGPQELQPNQSWSFKFTANFFLHRILYFCHFTWNKGDHWFDIYKDERDGPIDTDLYAWDIVPTGACRFLDNGKVRQCIDWNDGKSGEKQQIGHENTSATTIVV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3156 161 PANTHER - 12 138 IPR010264 -
Aev05g3156 161 PANTHER S-PROTEIN HOMOLOG 2 12 138 - -
Aev05g3156 161 Pfam Plant self-incompatibility protein S1 35 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3156 Aev-Chr5 31611802 31612287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3156 27 139 Carbohydrate Esterase AT3G16970 39.316 1.02e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3156 - - thj:104814026 108.612