Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev05g3152 | ATGATTTCAGGCTCCAAAATGGCGTTTCCACTACTAACAATAATACTTGTTGTTGTGAATGTTTTGAGTGGTTGCGAATCAAAAGTGACGGTTCAGATAACAAACAAATTGTCGAATAATATGCAATTAGGTCTTCATTGCAAGGGCAAGAAAGACGATCTTGGGCCACAAACACTGAATCCAGGTGAAAATTACAGTTTTAGGTTTAGCCCAAATCCAGTTATCCCCGCAACGTTGTATTTTTGCCACTTTAGTTGGGCAGCAGAAGGAGGAGATCGTTGGTTTGATATTTATGATCAACAGAGAGGAGAGATGATGGTTTAA | 324 | 0.392 | MISGSKMAFPLLTIILVVVNVLSGCESKVTVQITNKLSNNMQLGLHCKGKKDDLGPQTLNPGENYSFRFSPNPVIPATLYFCHFSWAAEGGDRWFDIYDQQRGEMMV* | 108 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev05g3152 | 107 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - | |
| Aev05g3152 | 107 | Pfam | Plant self-incompatibility protein S1 | 30 | 102 | IPR010264 | - | |
| Aev05g3152 | 107 | SUPERFAMILY | Cupredoxins | 28 | 91 | IPR008972 | - | |
| Aev05g3152 | 107 | PANTHER | S-PROTEIN HOMOLOG 18-RELATED | 19 | 103 | - | - | |
| Aev05g3152 | 107 | PANTHER | - | 19 | 103 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev05g3152 | Aev-Chr5 | 31601450 | 31601773 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev05g3152 | 28 | 102 | Carbohydrate Esterase | AT3G16970 | 44.000 | 8.00e-14 | 61.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev05g3152 | - | - | mtr:MTR_6g004340 | 84.3445 |