Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3150 ATGTCTTGTACTACTACAACATGGACAGCTGAGGAAAACAAGGCTTTTGAAAGAGCTTTAGCAACTTATGACAAGGACACTCCAGACCGATGGAACAATATTGCTAAGGCTGTTGCTGGAAAAACTCCCGAACAAGTCAAGAAGCACTATGACCTCCTTCTCGCCGACCTTAACCTCATTGAGTCAGGCCAATTTCCATTTCCATCCTACAAGGATTCTACTTAA 225 0.4311 MSCTTTTWTAEENKAFERALATYDKDTPDRWNNIAKAVAGKTPEQVKKHYDLLLADLNLIESGQFPFPSYKDST* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3150 74 CDD SANT 7 54 IPR001005 -
Aev05g3150 74 Pfam Myb-like DNA-binding domain 7 50 IPR001005 -
Aev05g3150 74 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 73 - -
Aev05g3150 74 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Aev05g3150 74 ProSiteProfiles Myb-like domain profile. 8 54 IPR001005 -
Aev05g3150 74 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 73 IPR044636 GO:0003700
Aev05g3150 74 SMART sant 4 56 IPR001005 -
Aev05g3150 74 Gene3D - 2 67 - -
Aev05g3150 74 ProSiteProfiles SANT domain profile. 1 50 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3150 Aev-Chr5 31588755 31588979 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3150 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3150 - - pvy:116119430 111.694