Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3146 ATGGATTCTTTCAATAGTGGTTCTTCATTTCCACCAAATCAGCCCCCTCTTCCTCATCCTGATGACCCTCCAGAAGTCAAAGAGGAGAAGTTAATGGAGCATTTTTGGCACCAGCAGCGTTTTGATTATAAAAACAAAAAAGGGGAAAAACCGCCGGAATTGGTCCCAGGTCGGATCAAGAAGATAATGAAATCAGATAAGAATGTCAAGTTGATAAGTTCAGATGCTCCTAAAATGCTTGCAAAAGTATGTGAGGTGTTCATCCAGGAGCTCACCTTTCGAGGATGCATGATTGCTGAAGCCCAGAAGAAGTCCACCCTGAATCACTGCCACGTGTCCATGGCAGTTAAGAAAGACAAAGTCTTCGATTTCCTTGCTAATGTTCCTAATTGCGGCCATGAACATCATGACGATGTTGAAGTGAACGCTGGAAATATTATGATGAATGTGGAGCAAATGATAGCGAGGAATCAAGATGTGATAGAGAGAAACCAGCAACAGTTGATAATCCAACCTCCTTATCTGTCGTCTGATCATTCTCGGATGATGATGAGTCAATATCTGCCTTATGATCATCAATATTTGCTGTCTGATCAACACCAATTCCAAACGGTGCAGTGTTCTTATTTGTCGTCTGATCAGCCACAAACAATGCAACTTTCTTATCTGTCGACCGATCAATCTCAATCTCAGTTGATGTTGCCTTCTTATCTACCGTCTAATCAGTCACAAATGATGCAGCCTCCTTATCAGCTGCCTGATCAGTCACAAATAATACAACATTCTTATCTGTCATCTGATCAATCACAAATGACACAGCCTCCTTATCTGCCGTCTCACCCGTCACAAATACTTCAACATTCTTATCTCTCATCTAATCAATCTCAAATGACGCAGTCTTCTTATCTGCCGTCCGATCAACCTCAAATGATGGTTCCTCAATATTTTCCATCTGAGACAATGCAGCCACCACCATATCAGCCTTCTGAATATCCCTCTTACAATTTTCATCCCAAGTGA 1020 0.4167 MDSFNSGSSFPPNQPPLPHPDDPPEVKEEKLMEHFWHQQRFDYKNKKGEKPPELVPGRIKKIMKSDKNVKLISSDAPKMLAKVCEVFIQELTFRGCMIAEAQKKSTLNHCHVSMAVKKDKVFDFLANVPNCGHEHHDDVEVNAGNIMMNVEQMIARNQDVIERNQQQLIIQPPYLSSDHSRMMMSQYLPYDHQYLLSDQHQFQTVQCSYLSSDQPQTMQLSYLSTDQSQSQLMLPSYLPSNQSQMMQPPYQLPDQSQIIQHSYLSSDQSQMTQPPYLPSHPSQILQHSYLSSNQSQMTQSSYLPSDQPQMMVPQYFPSETMQPPPYQPSEYPSYNFHPK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3146 339 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 27 231 IPR027170 GO:0003700|GO:0006355|GO:0016602
Aev05g3146 339 MobiDBLite consensus disorder prediction 295 339 - -
Aev05g3146 339 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 231 - -
Aev05g3146 339 MobiDBLite consensus disorder prediction 295 316 - -
Aev05g3146 339 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g3146 339 SUPERFAMILY Histone-fold 40 128 IPR009072 GO:0046982
Aev05g3146 339 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 56 116 IPR003958 -
Aev05g3146 339 Gene3D Histone, subunit A 22 130 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3146 Aev-Chr5 31564182 31567015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3146 35 148 CCAAT-HAP5 Transcription Factor Family AT3G48590 39.130 6.51e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev05g3146 CBFD_NFYB_HMF 8.6e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3146 K08066 - hro:HELRODRAFT_184852 99.3673