Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3118 ATGTCTTTCTCCGGCGGCGACAGCGGCGGCGGAGTTATCTCCGGCAATCCCCAGCTATACTTCTGCCACCAATGCAACCGTACCGTCTCCATCGTCCCTCCCTCGTCCTCCGAACTCCTCTGCCCTAATTGCAACGGCGGTTTCCTCGAAGAGCTCGAATCCCCAATTCCTAACCCTAATCCTATCCATCCCATCCTCTCCTTCAATTCCGACATCGGTGGAGGTGGCGCCGGAGGAATCGGCGGCACCTTCCCCTTCCTATTCTCCGGTGGTGACGATCTCTCCGCCCTGTTCGGAGGCGGCGCTCCCCACGCTGCCGCCGCCGATGCCTTCAACCCGTTTGTCTTCCTCCAGAACTACATCCAAACTTTAAGAGCTGGCGGCGCCAACGTCCAGTTCGTGATCGAGAACTCCGGAGATGCCGGCGGAGGCGGCGGCTTCCGTTTCCCTGGAAACCTAACCCACGGCGACTACTTCTTCGGCCCTGGGCTGGAGGAGCTGATCCAGCACCTCGCGGAGAATGATCCGAACAGGTACGGAACGCCGCCGGCGTCAAAATCCGCCGTGGAGGGGCTACCGGACGTGTCGGTAACGGAGGAGCTGCTGGAATCGGATTCATCGCAGTGTGCTGTGTGTAAGGACACCTTCAAGCTCGGAGAATCGGCGAAGCAGATGCCGTGCAAGCACATATATCATTCCGATTGCATCTTGCCGTGGCTGGAGCTTCACAATTCATGCCCTGTTTGCCGCTACGAGCTCCCCACCGATGATCAGGATTATGAGCACAGAGCCCAGCGTGGGGGTGGCCCCCCTGCTCCTGCGCCCGTGAGCCGAGCCGCGGGGCCAGGTGGTTCGGCTGAATCTTCTGGTGGCAATGGCGGTGGTGGGGATGATAATCGGCAAGTATTGGAAAGGAGGGTGTTTAGGGTGTCTTTGCCGTGGCCGTTTCGGCAACTCGCCTCTTCTGCGGAGACGAGTAATAACAACAACAGTGGAAATAACAGTGGGCAATCGAATTCTGAGAGTAGGGGGAACCAGAATTTTGAGCCAGGGGCTAGACAAGAAGATCTCGATTGA 1077 0.584 MSFSGGDSGGGVISGNPQLYFCHQCNRTVSIVPPSSSELLCPNCNGGFLEELESPIPNPNPIHPILSFNSDIGGGGAGGIGGTFPFLFSGGDDLSALFGGGAPHAAAADAFNPFVFLQNYIQTLRAGGANVQFVIENSGDAGGGGGFRFPGNLTHGDYFFGPGLEELIQHLAENDPNRYGTPPASKSAVEGLPDVSVTEELLESDSSQCAVCKDTFKLGESAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDQDYEHRAQRGGGPPAPAPVSRAAGPGGSAESSGGNGGGGDDNRQVLERRVFRVSLPWPFRQLASSAETSNNNNSGNNSGQSNSESRGNQNFEPGARQEDLD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3118 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 11 326 - -
Aev05g3118 358 MobiDBLite consensus disorder prediction 260 299 - -
Aev05g3118 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 256 IPR013083 -
Aev05g3118 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 11 326 - -
Aev05g3118 358 SUPERFAMILY RING/U-box 193 256 - -
Aev05g3118 358 CDD RING-H2_RNF126_like 208 250 - -
Aev05g3118 358 Pfam zinc-ribbon 18 52 IPR039525 GO:0061630
Aev05g3118 358 MobiDBLite consensus disorder prediction 319 349 - -
Aev05g3118 358 SMART ring_2 209 249 IPR001841 -
Aev05g3118 358 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Aev05g3118 358 Pfam Ring finger domain 208 250 IPR001841 -
Aev05g3118 358 MobiDBLite consensus disorder prediction 319 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3118 Aev-Chr5 31422421 31423497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3118 167 265 C3H Transcription Factor Family AT5G15820 53.535 6.56e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3118 - K11982 gmx:100818686 414.075