Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3092 ATGGAGCAACAATTTTGTGATGAATCTGCGATAAACACTTCGGATTTGAAGAGTGCGCAGAAGACTCTTCACGAAGCTGGTGAACTAATTGCGTGCCCCACACCACAGAAGACGAGCGAGCCGTTACCCTCCAAATCCGAGGAGCCACAAATTCAGCTTCCAGAAAAATATAGAGCGGTTGCTGATTTGTTTAGTCATATGAGCTGTTCACTTAGATTGCTCCATCTGCGCCAAAAGTCTCCAACTTTTCAAAATGTTTCCACTCAGGTGGAAATTCTGGCTGAGAGGGAATTCTCATATGCCCACCTTGCACAGATGAAGTATATACTTCCTGAAGGCATATGTATAGAGAAGGTGCTTGTCCATGATAAGAAGAGCTTGTGTATGAAGCCGGATATGAAGATCACCTTGGTATTTGATGTTGTGGAAGAACAGTCTGAAGAAGAGTCTGCCGATTTGGCTCTTCGGCGATATTTTAGTTCCAGGCTTCTTGATTTCTTCAAGGTGCATCCTGAGGTTACCGACATTCCGGAGGCTGTACTACCAGAGCCCTTTTGCCAAAGGGCATGTAGCTTGATTAGTGAAGATTCACCTGTAAATTCTTCAACAGATATTTTAACAACTTCCAACCAAACTGAACCATTGCCTGGGAAATTCCAACTATATCCATCTTTTAGCAGACATTTTTCTGAGAAGATTGTCGCAATCCAGACAGAAGAGCTTCAGTGCATTTCATCAACTAAAACTTCCCTGCCATCCTGTGCGTCTGAATGCCTGGATAATCAAGAAAGTGAAAGCAGATGGAAGGAAGAATGTGCACCATTATCCGAATGTATTACTAATCTGACTACAGAAAGAGGGCAACCGAAGGAAGCCCTTTCTACGCACTTTCAACCTAGTGTTGTTGATACACCAGTGCATATGGTTCGCCCTCCACATTCTGGTGATATCAGTGATTCTAAAAGCCCTGATATCAAAATTTTCTCCTCCCCCAATAGTTTGATGACAGGGACACCTGCACAGTCAGCGCCTGGGAGGTTGATGCCCATTTCTGATGCTAAGCCTCAGAAGACGGATACCCTAAAGTCAACTTCATGTCATAAACCAGCAAAAAGAGTGCTGGACTTTTCACTCATGGAAGACAATGATGGTTCTGACCTCAGAGTAGACAAGTTAGAATCTAGCAGAAGTTCTCTTGAATTTGATTGTACCCGTGAATCTAGCAGTGGATGTGCTGAGGATTGCAATTCTTCTGGTTCTGTGTTGCTGCCTCAGGAGGTGGAACAGAGCTTTGGTCACTCTCTTGAGAATACTGAAGTTCAAGTTGGTTTCGATACAAGGCGTACAAAATCATCTTCGTTGCAGGACCTCGTTAATGTGATTCATTCTATATTTCAATCTGTCAGCAGAACTCCAATCACAAAAGAGGAGCTCCTGCAGAAGATTATTATGAACAGTTTGGATTTTGTTGAGATTAGCGAAGTTGAAGAACAGGTCAATTTTCTTGAAAAGTTGGTGCCAGATTGGATCAGCAAAAAGTTGCTTCCGAGTGGAGATATCATGTACTTTATCAAGAAAGTGTCAGATATGGATTCAGTTCGATCAAGGCTTTCTAGCAATGGGACTATTGGAGCTGAGTGA 1641 0.429 MEQQFCDESAINTSDLKSAQKTLHEAGELIACPTPQKTSEPLPSKSEEPQIQLPEKYRAVADLFSHMSCSLRLLHLRQKSPTFQNVSTQVEILAEREFSYAHLAQMKYILPEGICIEKVLVHDKKSLCMKPDMKITLVFDVVEEQSEEESADLALRRYFSSRLLDFFKVHPEVTDIPEAVLPEPFCQRACSLISEDSPVNSSTDILTTSNQTEPLPGKFQLYPSFSRHFSEKIVAIQTEELQCISSTKTSLPSCASECLDNQESESRWKEECAPLSECITNLTTERGQPKEALSTHFQPSVVDTPVHMVRPPHSGDISDSKSPDIKIFSSPNSLMTGTPAQSAPGRLMPISDAKPQKTDTLKSTSCHKPAKRVLDFSLMEDNDGSDLRVDKLESSRSSLEFDCTRESSSGCAEDCNSSGSVLLPQEVEQSFGHSLENTEVQVGFDTRRTKSSSLQDLVNVIHSIFQSVSRTPITKEELLQKIIMNSLDFVEISEVEEQVNFLEKLVPDWISKKLLPSGDIMYFIKKVSDMDSVRSRLSSNGTIGAE* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3092 546 CDD Cdt1_m 35 184 IPR014939 -
Aev05g3092 546 PANTHER DNA REPLICATION FACTOR CDT1 7 539 IPR045173 GO:0003677|GO:0030174|GO:0071163
Aev05g3092 546 SMART CDT1_2 53 183 IPR014939 -
Aev05g3092 546 Pfam DNA replication factor CDT1 like 53 117 IPR014939 -
Aev05g3092 546 Gene3D - 444 542 IPR038090 -
Aev05g3092 546 PANTHER EXPRESSED PROTEIN 7 539 - -
Aev05g3092 546 Pfam DNA replication factor Cdt1 C-terminal domain 445 512 IPR032054 -
Aev05g3092 546 SUPERFAMILY "Winged helix" DNA-binding domain 45 185 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3092 Aev-Chr5 31266387 31269398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3092 334 537 Core DNA Replication Machinery Family AT2G31270 31.081 9.77e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3092 K10727 - gmx:102670055 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3092 05 31266387 31269398 Aev05g3092 05 31266387 31269398 ECH