Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3089 ATGTCGTCATCATCATCATCATCAACCCCTCAAATCATAACCTGCAAAGCTGCAGTGGCATGGGGTGCTGGAGAAGCACTGGTGATGGAGCAAGTGCAAGTGAGCCCTCCCCAATCAATGGAGATCCGGATTAAGGTTGTCTCCACCTCTCTCTGTCGCAGTGACCTTTCAGCCCTGGATTCTCATGCCATATTTCCTCGAATATTTGGCCATGAAGCATCAGGGATTGTTGAAAGTGTGGGGGAGGGAGTGACTGAATTCAAAGAGGGAGACCATGTGCTAACAGTCTTCATAGGAGAATGCATGGAATGCAAGATTTGCACATCTGGAAAGAGTAACACTTGTCAAGTTTTGGGATTGGAAAGAAAAGGTGTAATGCATAGTGATCAGAAGACGCGCTTCTCGGTAAAAGGGAAGCCTGTATATCATTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTTCACTCTGGATGTGCTGTGAAAGTTAGCCCCCTTGTTCCTCTTGAGAAAATATGCCTTTTGAGCTGTGGAGTTGCTGCAGGTCTAGGTGCAGCATGGAATGTTGCTAATGTCTCAGAAGGATCAACAGTGGTGATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAACTAAGAGGTGCATCTCGAATAATTGGTGTTGACAACAATCCAGAGAAGTGTGAAAAAGCAAAAGCTTTTGGGATTACAGAAGTTGTTGACCCTAATTCATACCAAGAACCTATTGCTCAGGTTATTAAGCGCATAACTGATGGTGGAGCAGATTTTTCTTTTGAATGTGTTGGTGACACTGACATGATAACCACTGCATTGCAATCATGCTGTGATGGATGGGGTATGACAGTAACACTTGGTGTGCCTAAGGTGAAACCTGAGATGTCAGCTCATTATGGACTTTTCTTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTGGTAGAGAAATATGTCAACAAGGAAATTCAGATTGATGACTACATAACACACAATTTGCCATTTGATGATATTAACAAAGCTTTTGAGCTCATGAGGGAAGGAAAGTGCCTCCGTTGTGTTATCCACATGCCAAGATAA 1143 0.4287 MSSSSSSSTPQIITCKAAVAWGAGEALVMEQVQVSPPQSMEIRIKVVSTSLCRSDLSALDSHAIFPRIFGHEASGIVESVGEGVTEFKEGDHVLTVFIGECMECKICTSGKSNTCQVLGLERKGVMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPLVPLEKICLLSCGVAAGLGAAWNVANVSEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPEKCEKAKAFGITEVVDPNSYQEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGMTVTLGVPKVKPEMSAHYGLFLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFDDINKAFELMREGKCLRCVIHMPR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3089 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 342 IPR036291 -
Aev05g3089 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
Aev05g3089 380 PANTHER ALCOHOL DEHYDROGENASE 9 378 - -
Aev05g3089 380 CDD alcohol_DH_plants 13 377 - -
Aev05g3089 380 Pfam Alcohol dehydrogenase GroES-like domain 41 163 IPR013154 -
Aev05g3089 380 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 9 378 - -
Aev05g3089 380 Pfam Zinc-binding dehydrogenase 207 330 IPR013149 -
Aev05g3089 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Aev05g3089 380 SUPERFAMILY GroES-like 9 188 IPR011032 -
Aev05g3089 380 Gene3D - 18 373 - -
Aev05g3089 380 Gene3D - 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3089 Aev-Chr5 31247748 31250813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3089 12 115 Monolignol Biosynthesis Gene Families AT2G21730 34.234 6.86e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3089 K00001 - gmx:100819938 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3089 05 31247748 31250813 Aev05g3089 05 31247748 31250813 ECH