Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3065 ATGATGGATAAAGAAGATGGTCTAAACAATGGTAATGGAGACGGCGCCGATGTGCGTGACATCGAAAATGAAGGTTTGCTGGATGGGAAGGGGGAAATCCGGAGGCACTGGTCGGAGTTCTCTGAGAGGAACATGTCATATGCAGAGCCGCTTCTCACGAAAAGGATTAATACCACTTCCCAGATTGCTATAGTTGGTGCTAATCTCTGCCCTATTGAAAGCCTTGACTATGAGATATTTGAGAATGAAATTTTTAAGCAGGATTGGAGGTCAAGGAGGAAGGTTCAGATATTCCAGTATGTGATACTTAAGTGGGCATTTGCTCTTCTTATTGGATTAGGTACTGGACTTGTTGGCCTCTTCAATAACATTTCAGTTGAAAACATAGCAGGTTTCAAGCTTCTTTTGACAACCAATCTCATGTCTAAACACAAATATCTTCAGGCTTTTGTTGCATATGCTGGTATCAATGTAGTGTTAGCAGGAGCAGCTGGTGCACTTTGTGCTTTCATTGCTCCTGCAGCTGCCGGCTCGGGTATTCCAGAGGTAAAAGCATATCTTAACGGTATCGATGCTCACTCGATACTCGCTCCGAGCACTCTTTTTGTAAAGATTTTCGGTTCCATCCTTGGAGTTTCTGCTGGATTTGTGGTAGGCAAAGAAGGACCTATGGTACATACAGGTGCATGCATAGCTTCTTTATTGGGGCAAGGTGGATCTCGCAAGTATGGCTTGACTTGGACTTGGCTTAGATATTTCAAAAATGACCGAGACCGGCGAGACATGATAACTTGTGGCGCGGCTGCCGGCGTTGCTGCTGCCTTTCGTGCTCCAGTTGGTGGTGTCCTCTTTGCCCTTGAAGAAGCAGCTTCATGGTGGAGAAGTGCTCTTCTGTGGAGGACATTTTTCACAACAGCAGTAGTTGCTATTGTCATAAGAGCCGCAATTCAGTTGTGCTCCACCGGGAAATGTGGCCTATTTGGGGAAGGTGGCTTGATTATGTATGATGTCAGTTCAGCAAAGGTAACTTACAGCGGTGGCGACATAGTAGCAGCGCTGATATTGGGAATCATCGGAGGCATTCTTGGAAGCATATATAATTACCTCGTCGACAAGGTTGTTCGTACATATAGCATCATCAATGAAAAAGGTGCAATTTACAAAGTGTTACTTGTTGTCACAATTGCTCTATTGACATCATGTTGTTTCTATTTCCTGCCATGGATTGCAACCTGTATTCCCTGCCCTACTAATGCAACAGTTGTCTGTCCCTCTGTCGATGAATCCGGTGAATACAAGAGCTTTCAGTGTAAACCAGGCTACTACAATGATCTTGCTTCTCTATTTCTAAACACAAATGATGATGCTATTCGGAATCTGTTCAGCTCAAGGATAACAAAGGAGTTTCACATCTCAAGCTTGTTTATCTACTTTGCTACCATTTACTTTCTTGGGATAGTTACTTATGGTATTGCTGTTCCGTCCGGCCTTTTCATTCCTGTGATTCTTGCTGGTGCTGCCTATGGCCGGCTTCTCGGGAGACTATTTGAACCGATAGCGAAACTTGACACAGGACTCTTTGCACTCCTTGGAGCTGCTTCATTCCTTGGTGGAACCATGAGAATGACAGTGTCACTTTGTGTCATATTGCTTGAACTCACAAGTGATCTCTTGCTACTTCCTCTTGTGATGTTGGTCTTGTTAATCTCAAAAACCGTTGCTGATAGCTTCAACAAGGGTGTCTATGATCAGATACTCAAGATCAAAGGGCTTCCTTACTTAGAGGCTCATGCAGAACCTTACATGAGGAATCTCGTCGCCCGTGATGTTGTGTCCGGCCCACTAGTAACCTTTTCTGGTATAGAAAAAGTTGGGAACATATTACATGCTCTGGAAAATACAGGACACAATGGTTTCCCTGTGATCGATGAACCGCCATTCTCGGATGCGCCGGAGTTGTGTGGACTTGTGCTGAGGTCTCATTTGCTTGTGTTGCTCAAGGGGAAGAACTTCACAAGGGATAGGGTATTCACGAGCCGCGGCATCTTCAAAAGACTTTCTGCATTGGATTTTGCCAAGGCAGGGTCAGGGAAAGGATTGAAACTAGAGGATCTAGATATCAAGGAGGAAGAGAAGGATATGTATGTTGATCTCCATCCCATAACTAATGCATCACCATACACAGTTGTTGAGACGATGTCGCTCGCCAAAGCCGCCATTCTTTTCCGCCAACTTGGACTCAGGCATATGTGTGTTGTCCCTAAGAGCCAAGAGAGGCCTCCGGTTGTTGGGATTCTAACGCGCCACGATTTCATGCCGGAACATGTTTTGGGACTATACCCTGATATCAAGCCTCACAAAGGGGACTGA 2370 0.4502 MMDKEDGLNNGNGDGADVRDIENEGLLDGKGEIRRHWSEFSERNMSYAEPLLTKRINTTSQIAIVGANLCPIESLDYEIFENEIFKQDWRSRRKVQIFQYVILKWAFALLIGLGTGLVGLFNNISVENIAGFKLLLTTNLMSKHKYLQAFVAYAGINVVLAGAAGALCAFIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYGLTWTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVIRAAIQLCSTGKCGLFGEGGLIMYDVSSAKVTYSGGDIVAALILGIIGGILGSIYNYLVDKVVRTYSIINEKGAIYKVLLVVTIALLTSCCFYFLPWIATCIPCPTNATVVCPSVDESGEYKSFQCKPGYYNDLASLFLNTNDDAIRNLFSSRITKEFHISSLFIYFATIYFLGIVTYGIAVPSGLFIPVILAGAAYGRLLGRLFEPIAKLDTGLFALLGAASFLGGTMRMTVSLCVILLELTSDLLLLPLVMLVLLISKTVADSFNKGVYDQILKIKGLPYLEAHAEPYMRNLVARDVVSGPLVTFSGIEKVGNILHALENTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKGKNFTRDRVFTSRGIFKRLSALDFAKAGSGKGLKLEDLDIKEEEKDMYVDLHPITNASPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQERPPVVGILTRHDFMPEHVLGLYPDIKPHKGD* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3065 789 ProSiteProfiles CBS domain profile. 721 783 IPR000644 -
Aev05g3065 789 PRINTS Chloride channel signature 268 287 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 543 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 581 595 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 204 223 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 525 541 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 173 190 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PRINTS Chloride channel signature 493 513 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g3065 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 38 787 - -
Aev05g3065 789 Gene3D Clc chloride channel 96 594 - -
Aev05g3065 789 Gene3D - 595 778 IPR046342 -
Aev05g3065 789 SUPERFAMILY Clc chloride channel 82 597 IPR014743 -
Aev05g3065 789 CDD CBS_pair_voltage-gated_CLC_euk_bac 607 774 - -
Aev05g3065 789 Pfam CBS domain 725 771 IPR000644 -
Aev05g3065 789 SUPERFAMILY CBS-domain pair 598 772 IPR046342 -
Aev05g3065 789 PRINTS Plant CLC chloride channel signature 78 86 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g3065 789 PRINTS Plant CLC chloride channel signature 289 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g3065 789 PRINTS Plant CLC chloride channel signature 321 328 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g3065 789 PRINTS Plant CLC chloride channel signature 303 313 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g3065 789 PRINTS Plant CLC chloride channel signature 445 461 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g3065 789 Pfam Voltage gated chloride channel 163 575 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g3065 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 38 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3065 Aev-Chr5 31092160 31095766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3065 1 787 Ion Channels AT5G49890 71.429 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3065 K05016 - jre:108982434 1214.91