Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3030 ATGCAAAACCCAGTATCACTATCGAGCTCACACGTGAAACTGCTCGCCTTCGATCTCCTCACCCTCACCCCATCTTCTTCCTTCTCAGATCCGTTCCCTTCATTCTCGCGTCGAGGAATCCCTCTCCATCTAGCAGAAACCGTCGGGACAGTGACCCTTCGCGACCACAAGCCACATAAGTTCCTTCGCTTCGCCATCGATGACGGCACCGGCTGCGTCCCCTGTATCCTCTGGCTCAACCACCAGACCTCGCCCTACCTGGCACGTCGCCGGAGCCCCAATGACGTGCGGCTGATGGCGGAATCTTCGGCGGGGTTCGCGGCGGCGATTAGGGTTGGGACGGTGGCGAGGGTGAGGGGGAGGCTCAGCTGGTACAAGGGGAAGGTGCAGATAACGGTATCGGATGTTGTTGTTGAGAGGGATCCCAATGCTGAGCTCCTTCATTGGCTCGATTGCCTCAATCTTGCTAGTAACTGTTATAATCTCTTGCCCTCTGCTACTGCTACACACAAGTAG 516 0.5659 MQNPVSLSSSHVKLLAFDLLTLTPSSSFSDPFPSFSRRGIPLHLAETVGTVTLRDHKPHKFLRFAIDDGTGCVPCILWLNHQTSPYLARRRSPNDVRLMAESSAGFAAAIRVGTVARVRGRLSWYKGKVQITVSDVVVERDPNAELLHWLDCLNLASNCYNLLPSATATHK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3030 171 SUPERFAMILY Nucleic acid-binding proteins 36 154 IPR012340 -
Aev05g3030 171 PANTHER CST COMPLEX SUBUNIT STN1 6 167 - -
Aev05g3030 171 PANTHER REPLICATION PROTEIN A-RELATED 6 167 IPR040260 -
Aev05g3030 171 Gene3D - 6 163 IPR012340 -
Aev05g3030 171 Pfam OB-fold nucleic acid binding domain 48 137 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3030 Aev-Chr5 30883943 30884458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3030 39 157 Core DNA Replication Machinery Family AT2G24490 29.412 1.23e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3030 K23312 - zju:107409585 201.83