Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3021 ATGGAGGAAAATAAGATTTTTGGTTCTGTTCATGTGGCTAAGGGTGATGAAGCCCCAGATGGCTTCCACGTGGCACCAAGAACTGAAACTTTGCAGTTTGGCATGCCTACTTCCGAGCCACCGGCAGCTCCGCCGGCGGTGGTGGCTCCGTCCACGACGGCGGTGACGCCGGGAACAGAAGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCTGATGGCAGGCCAAGGGCGGAGGTGGCGATGGCGCTGTCGCCGATGCCGATATCGGCGTCAATTCCGTTGACCGGAGATTACTCAGCTTGGAAAAGGGGCAGAGGGAGGTCTGTTGAATCAGTGAAGAAGTCATATAAATTTTATGATGCTGAAAGTGCTGCAGGACCAGGCAATGGAATCGCATACTCAGTTGGTGCAAATTTTACACCTCACATTCTTACAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCCAACAAGGATGCCGTGCTATATGCATTCTCTCTGCCAATGGAACAATTTCAAATGTTACGCTTCGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTATCTGGCTCATATATGCCAACTGAGAACGGATTCACAAGGAGCAGATCTGGTGGGATGAGCATCGCATTGGCAGGTCCAGACGGTCGAATAATGGGAGGTGGACTTGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTCGTTGGTAGTTTTGTTCCAGGGCACCAGCTGGAGCAGAAACCAAAGAAGCAAAGGGTGGAGCATATATCCGCCGTTGGCCCTCCACATATTAGTACTATCTCCGCCGGAGAATTGAAAATCAGTCTTGGTGGAGTAGAGCCTTGTCAACCATATCATGATTTGACTATGCTGACAAATTAA 933 0.4973 MEENKIFGSVHVAKGDEAPDGFHVAPRTETLQFGMPTSEPPAAPPAVVAPSTTAVTPGTEGKKKRGRPRKYGPDGRPRAEVAMALSPMPISASIPLTGDYSAWKRGRGRSVESVKKSYKFYDAESAAGPGNGIAYSVGANFTPHILTVNAGEDVTMKIMSFQQGCRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGFTRSRSGGMSIALAGPDGRIMGGGLAGLLVAAGPVQVVVGSFVPGHQLEQKPKKQRVEHISAVGPPHISTISAGELKISLGGVEPCQPYHDLTMLTN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3021 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 300 IPR039605 GO:0003680
Aev05g3021 310 Gene3D - 143 275 - -
Aev05g3021 310 MobiDBLite consensus disorder prediction 32 76 - -
Aev05g3021 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Aev05g3021 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 264 - -
Aev05g3021 310 CDD DUF296 142 255 IPR005175 -
Aev05g3021 310 ProSiteProfiles PPC domain profile profile. 138 280 IPR005175 -
Aev05g3021 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 9 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3021 Aev-Chr5 30813474 30817113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3021 51 268 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 64.602 2.25e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3021 - - adu:107489679 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3021 05 30813474 30817113 Aev05g0912 05 6423884 6427075 ECH
Aev05g3021 05 30813474 30817113 Aev05g3021 05 30813474 30817113 ECH
Aev05g3021 05 30813474 30817113 Aev09g1624 09 20134368 20138164 PCT