Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3008 ATGGCTTCCAATGCTAATGAACATAGAAAATGTGAATTACTCCAAGCTCAAGCTCAATTGTACAGGCTCATGAACATTTACATGGTGCCTATGTCAATCAAATGGGCTGTTAACCTTGGTATACCGGATATCATTCGCAACCACAAAGCCGAATCCATAATTCTTACCGAATTAGTTTCGGCTCTTAAAATTCCACAAGCGAAAGCTCTTTATGTTAAGCGCATCATGCGCTTATTGGCACACAATGACATTTTCGATGCCATTGTGAAAACGGATGAAGAAGACAAAGAAGTAGCATATGCTCTTACTCCAATTTCAGAGCTTCTTGTAAAAGGCACTGATCATTGTTTAACTCCAATTGTTGACTATTTTGCTGACCCAACAATTGTTGATTTGTTTCATCACTTAGGGAAATGGACTTATGGTGAGAAGATAACAATTATTGAGACTGCATTAGGCTATAAAAGCTATTGGGATTTTGCTCAACAAAATCCTACACATTTGAATCTTTTCAATGGGGCCATGTCAAGTGATTCTAACATGCTGAGGTTGGCATTAAGAGGATGCAAATCTGCATTTGAAGGTCTGAATACCATTGTTGATGCCGGCGGGGCAACAGGAAACGCGACAAAAATCATTTCTGAGGCATTTCCTAAGCTGAAGTGCACAGTGTTAGACCTTTCTCATGTTGTTGAAGGTTTAAAGGGAAGTGAGAACTTGAAATTTGTTGGAGGGAACATGTTTGAGTCTATTCCTCAAGCTGATGCAGTTTTACTCAAGTGGATTATACACGATTGGAGTGATGATTATTGTCTACAACTCCTCAAAAATTGCAAGAAAGCTATTTCAAGCAGTGAAAATGGGAAAGTGATAATAATTGACATAGTGATAAATGAAGAAAAAGATGGGCATGAAATGACAGAAGGGAAACTTCTGTCTGACCTAGCTGTAATGACAATGCTCAATGCAAAGGAGAGAGATGAGAAAGAATGGAAGAGGCTCTTCTTGGAGGCAGGTTTCACAAAGTACAATATTTTTCCCATATTGGGTTATAAGTCTCTTATTGAGCTTTATCCTTAA 1080 0.3833 MASNANEHRKCELLQAQAQLYRLMNIYMVPMSIKWAVNLGIPDIIRNHKAESIILTELVSALKIPQAKALYVKRIMRLLAHNDIFDAIVKTDEEDKEVAYALTPISELLVKGTDHCLTPIVDYFADPTIVDLFHHLGKWTYGEKITIIETALGYKSYWDFAQQNPTHLNLFNGAMSSDSNMLRLALRGCKSAFEGLNTIVDAGGATGNATKIISEAFPKLKCTVLDLSHVVEGLKGSENLKFVGGNMFESIPQADAVLLKWIIHDWSDDYCLQLLKNCKKAISSSENGKVIIIDIVINEEKDGHEMTEGKLLSDLAVMTMLNAKERDEKEWKRLFLEAGFTKYNIFPILGYKSLIELYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3008 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Aev05g3008 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Aev05g3008 359 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 358 - -
Aev05g3008 359 Pfam Dimerisation domain 31 80 IPR012967 GO:0046983
Aev05g3008 359 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
Aev05g3008 359 PANTHER O-METHYLTRANSFERASE 2 358 IPR016461 GO:0008168
Aev05g3008 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Aev05g3008 359 Gene3D - 1 109 IPR036388 -
Aev05g3008 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Aev05g3008 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3008 Aev-Chr5 30713130 30714310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3008 17 340 Monolignol Biosynthesis Gene Families AT5G54160 29.762 6.39e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3008 K22588 - gmx:100818947 390.578