Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3000 ATGCTTCTGAAAAAATCGCCATCTCTAGTGTTCAAGGTGAGGAGGAACGCACCGGAGCTAGTTGCACCTGCTGGAGCCACTCCTCATGAGACTAAGCTTCTGTCAGAGATAGATGACCAGAAGGGTCTCCGTTGCCATATTCCGTTCGTGCAGTTATTTCGTTATCACCCCTCAATGAAAGGGAAAGATCCTGTCCAAGTTATTAGACAAGCACTCGCCAAAGCACTCGTGTTTTACTATCCACTGGCTGGGAGGCTTAGGGAATGTAGTCCCAATGGCAAGTTAATGGTGGATTGTAATGCACAAGGTGTTATGTTCACTGAGGCTCATGCCGATGTCACGCTTGACCAATTTGGCATTCATGATCTTCATCCTCCATTTCCTTGCTTTGATGAGCTCCTTTACATTGTTCCCGGTTCCGATGGGATTATTAATTCTCCAATCGTGCTTATTCAGGTAACACGACTCATGTGTGGTTGTTTAATATGTGCTATGCAATTTAGTCATGTGATGATTGATGGAATTGGAATTAACCAGTTCATAACGGCGTTGGCAGAAATGGCTCGTGGAGAACCAAAACTTTCGATTATGCCGGTGTGGTGTAGGGAGCTCTTATGTGCAAGAAACCCACCAAGAGTCACATGCATCCACCATGAATACCAACAAATACCATTTCACAACAAAAACAATTACCACCCTCTTTCCTTCTTCGTTGGCTCAAAGGAGATAGTTGCAATGCGCCGTCTTCTCCCCCCTGACATTGCTCGATCCGCCGCCACTTTCGAGGTCCTCACGGCGTGCTTGTGGCGATGCCATACAACTGCGATGCAATGGCAAAACCCTGATCAAGAGGTTCGCGTGTTGTGTTTTGCCAATGCACGTTTTAGACCTTGCAGGTTAAACCCTCCAATACCTGAAGGGTTTTACGGCAATGCTGCAGTGGCTCCTGCTGCAGTTTCCACCATGACAAACCTGTGTAGCCGCCCCTTAGAGTATGCCTTGGAGTTGGTGAAGAAGGCGAAGAATGAAGCAACCGAGGAGTATGTGCACTCTGCTATTGACCTTATGGCCATCGAGGGAAGACCCTACTTTACTAGAACAGGCTCTATTATGGTATCTGATTTTTCAAAATTTTGGCCAAGACATGTGGATTATGGTTGGGGCAAGTCATCGTTTAATGGGCTAGCCAAGACTAGTGATCTTGGGGAATATCATGGTTCGATCGTCTATATGCCCTATACTAACTCCGAAGGAGAGCAAGGCAAATTGATTCTTCTTTGCCTACCACAAGAAGCCATTGAGAGGTTTGAGACAGAGCTTAATGGAATGCTCAACGTCGAGGACAAACACCATAAAATCTTAAACTCAAATCTCTAG 1377 0.4597 MLLKKSPSLVFKVRRNAPELVAPAGATPHETKLLSEIDDQKGLRCHIPFVQLFRYHPSMKGKDPVQVIRQALAKALVFYYPLAGRLRECSPNGKLMVDCNAQGVMFTEAHADVTLDQFGIHDLHPPFPCFDELLYIVPGSDGIINSPIVLIQVTRLMCGCLICAMQFSHVMIDGIGINQFITALAEMARGEPKLSIMPVWCRELLCARNPPRVTCIHHEYQQIPFHNKNNYHPLSFFVGSKEIVAMRRLLPPDIARSAATFEVLTACLWRCHTTAMQWQNPDQEVRVLCFANARFRPCRLNPPIPEGFYGNAAVAPAAVSTMTNLCSRPLEYALELVKKAKNEATEEYVHSAIDLMAIEGRPYFTRTGSIMVSDFSKFWPRHVDYGWGKSSFNGLAKTSDLGEYHGSIVYMPYTNSEGEQGKLILLCLPQEAIERFETELNGMLNVEDKHHKILNSNL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3000 458 Pfam Transferase family 12 440 - -
Aev05g3000 458 PANTHER ALCOHOL ACYLTRANSFERASE 11 446 - -
Aev05g3000 458 Gene3D - 222 440 IPR023213 -
Aev05g3000 458 Gene3D - 9 221 IPR023213 -
Aev05g3000 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3000 Aev-Chr5 30655491 30659740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3000 12 440 Monolignol Biosynthesis Gene Families AT5G48930 28.700 1.72e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3000 K19861 K13610 gmx:100795237 554.673