Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2994 ATGATGTTTCCTTTACAACGAGGCAATGAGCTGGTGATCCAGTTTTCTAATAGCCCCCACCAACAGGAAATCTCCCAAGATCTGATTCTGCAGGTGGATGATTCTGCTTCTCTGGATGTCAATGATTCTCTTCTTCTTCATCATCATAATTTATTATTCCCTAATAATAATATTAGCAGCCACCACTCAAAGGAAGAAGATGGTGATTCTACTACTATTGATCATCATAAGAAGAAGAAGATGGTCCATAGAGAGATTGAGAAGCAAAGGAGGCAAGAAATGGCTACCCTTTACTCCTCTCTTAGATCCCTTCTCCCTCTTCACTTCATCAAGGGAAAGCGTTCAATATGTGAGCACATGAATGAGGCAGTGAATTACATAAAGCACAAGCAGAAGAACATCAAAGAGCTTGGTGCCAAGAGAGATGAACTCAAGAAACTCACTATTATTTCCAATAATCTGGAAAATAACCATAATGATGATTATGATGAGAACAACAACAACCCTACATCTAGTAATAATTGCAGCTTCATCAGTGTTCATGAGAACAAAAAAAACAATAATAATTGTGTTGTGGGAATTGAAATTAAGAGTGGGATCATGAGAGAGAAGGAAGAAGGGCTTATAGTATCAAAGTTAATGCAGTTACTGGTTGAAGAAGGAATTGAAGTTGTTAGTTACATTTCATCCAACGTCAATGCAAGATTGGTCCACAGTCTCCAGTGTGAGGTTGTTGACAATTCCAGCAGTGTAGATCTATCTGAGCTGAGAAGGAAAATTGCCAATTTAATATAA 795 0.3786 MMFPLQRGNELVIQFSNSPHQQEISQDLILQVDDSASLDVNDSLLLHHHNLLFPNNNISSHHSKEEDGDSTTIDHHKKKKMVHREIEKQRRQEMATLYSSLRSLLPLHFIKGKRSICEHMNEAVNYIKHKQKNIKELGAKRDELKKLTIISNNLENNHNDDYDENNNNPTSSNNCSFISVHENKKNNNNCVVGIEIKSGIMREKEEGLIVSKLMQLLVEEGIEVVSYISSNVNARLVHSLQCEVVDNSSSVDLSELRRKIANLI* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2994 264 MobiDBLite consensus disorder prediction 60 76 - -
Aev05g2994 264 MobiDBLite consensus disorder prediction 55 78 - -
Aev05g2994 264 SMART finulus 84 136 IPR011598 GO:0046983
Aev05g2994 264 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 264 - -
Aev05g2994 264 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 2 264 IPR015660 GO:0003700|GO:0006357
Aev05g2994 264 Pfam Helix-loop-helix DNA-binding domain 79 131 IPR011598 GO:0046983
Aev05g2994 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
Aev05g2994 264 Gene3D - 70 160 IPR036638 GO:0046983
Aev05g2994 264 CDD bHLH_AtORG2_like 79 148 - -
Aev05g2994 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 146 IPR036638 GO:0046983
Aev05g2994 264 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2994 Aev-Chr5 30615979 30617150 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2994 74 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.837 3.68e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g2994 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2994 - - aip:107644748 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2994 05 30615979 30617150 Aev05g2994 05 30615979 30617150 ECH
Aev05g2994 05 30615979 30617150 Aev09g2293 09 25404169 25405396 PCT