Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2992 ATGAGAAAGGGCAAGGAGAAAGAGGAGCAGCACCAAGAAAACTATAACAACACTGATGAAAACAAGAAGTGGATGCATAGGGAGACAGAGAGACAAAGAAGGCAAGAGATGGCAAAACTTTGTGCCTCTCTTAGATCTCTTCTCCCTTTAGAATACATTAAGGGAAGGCGCTCAATTTCTGATCACATGTATGAGGCAGTGAATTACATCAACTACCAACAGAATAAGGTGAAGCAGTTGGAAGAAAAGAGGGATAAGTTGAAGAAGCTTTGTGATTTGAGTAGTACTAGTGTTGATGAAGGATCTAGTACTAGTAGTAGTAATAATACCCATCATGTATACGTTCCTCCCTATGTTGTTGTTCATCCTTTGCAAGGCGGTGGTGGTGTTGAAATCATGTGCAGTTACAGCTCCAAGAATAAGTACTTTGCATCATCATTTTCTTTATCAACTTTATTAGACATTGTGATTCGGGAAGAAGGCCTTAATGTTGTCACCACTATTTCCACCACAAAAAATGGCAGATCCATACACACTATCCGATCAGAGGATCCAAATAGGAGTGGTATTGATTACTCTGATCTGCAAAGAAAGCTTACAGAAGCAATATCATCTTCAAGTAATAACTCTGGTTTGCAAGAGACTAATTTGTTTGAACCCTGA 663 0.3922 MRKGKEKEEQHQENYNNTDENKKWMHRETERQRRQEMAKLCASLRSLLPLEYIKGRRSISDHMYEAVNYINYQQNKVKQLEEKRDKLKKLCDLSSTSVDEGSSTSSSNNTHHVYVPPYVVVHPLQGGGGVEIMCSYSSKNKYFASSFSLSTLLDIVIREEGLNVVTTISTTKNGRSIHTIRSEDPNRSGIDYSDLQRKLTEAISSSSNNSGLQETNLFEP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2992 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 21 73 IPR011598 GO:0046983
Aev05g2992 220 MobiDBLite consensus disorder prediction 1 31 - -
Aev05g2992 220 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 5 211 IPR015660 GO:0003700|GO:0006357
Aev05g2992 220 Pfam Helix-loop-helix DNA-binding domain 23 74 IPR011598 GO:0046983
Aev05g2992 220 Coils Coil 70 90 - -
Aev05g2992 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 93 IPR036638 GO:0046983
Aev05g2992 220 CDD bHLH_AtORG2_like 22 90 - -
Aev05g2992 220 Gene3D - 10 101 IPR036638 GO:0046983
Aev05g2992 220 PANTHER TRANSCRIPTION FACTOR 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2992 Aev-Chr5 30592077 30593764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2992 18 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.799 2.75e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g2992 HLH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2992 - - ahf:112751692 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2992 05 30592077 30593764 Aev09g2292 09 25397040 25398160 PCT