Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2969 ATGTCTTTCTCGCCTCTCTTCTCTTCTCTTCTCTTCACCTCACCCACTTTGCGGAGTACACAACACAAACTCCACACGACACCTTCTTCTTCCATTTCCATGGCTTCTGCAACGCTCTCTCTGTTTCACCCTCTTCATTTCCCTTATTCCCATTCCTCTTCTCTCACAAGAACTCTCAACCCAACAACGCTATCTCGCTCTTCTCTTTCACTCCTTCCCTTCTCTCCTTCTTCCACAAAATTGCTGCCACTATCATTCAACACCAAGAATAAGCCCACTACTACTACCCCACCACGTGCCTACGTCACCGGACCCTCCTCCGACCCGATTTTCCCCGATCAGGTTCCAAAGATTGATGGGTCGGATTCCGATAAGGCCAACCCGCCCAAAGTCATAAGCTGGGGGCTGCTATGGATGCTGCTCATGAAGCACAAGCTGAGGCTTTCTCTTTGTCTCGCAACTCTTCTTGCTTGCACCACTTGTACTCTATCAATGCCCATTTTCTCTGGGCGGTTTTTCGAAGTTCTTATTGGTGCTAGACCAGAGCCATTATGGAGGTTGCTCAGCAAAATTGGAGTCCTGTATGCTCTGGAGCCACTTTTAACTGTTATTTTTGTTGTAAATATGAACACAGTATGGGAGAAAGTCATGTCAACTCTTAGAGCTCAGATTTTTGGCAGAATATTGATTCAGAAGGTTGAATTTTTTGACAAATACAAGGTTGGTGAACTCACTGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGATATTGTGAGTGAGAATGTCTCAAGAGATCGCGGATTCAGGGCATTATCTGAGGTCATTGGAACAATATTTATACTTTTTTCTCTATCCCCTCAACTGGCACCTATTCTGGGTGTTTTGATGCTTGCAGTTTCCATCTCAGTTGCTGTCTACAAGAGATCAACCTTCCCTGTTTTTAAAGCACATGGGATGGCCCAAGCATTCATATCTGACTGTGTATCAGAAACATTTTCTGCTATTCGAACAGTAAGATCCTTTGGCGGTGAAAAGCGCCAAATGTTTACATTTGCTAACCAGGTTCTATCTTTCCAAGCAAGTGGGATAAAGCTTGGTACTTTTAAATCATTGAATGAATCCATGACTAGGGTTGCTGTTTATATTTCTTTGATTTCATTATATTGTCTTGGAGGGAGCAAAGTTAAGGCGGGTGAGCTTTCTGTTGGAGCTATGGCATCTTTTATTGGATATACTTTCACTCTAACATTCGCAGTTCAAGGACTGGTTAATACTTTTGGAGATCTTCGTCGAAGTTTTGCTGCTGTTGAAAGGATCAACTCTGTTTTGTCTGGTGTTCAAGTTGATGAGGCCCTTGCCTATGGCTTAGAAAGAGAACTGAAACAAAAAGCAGTGGCTGATGAGAACTATAAATTGTTCTTCTCCGATAGTTCCACTGAGAAAATCCAAAAAAATTATTTGCATTACATGTCAGCACTAAAAACATCAAGCAACTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTGCATTTCTCTTATCCTTTAAGGCCGGATGTGGAAATCTTACGCGGTTTAAGTTTAAGACTAAAATGTGGAACTGTAACTGCACTAGTTGGTCCTAGTGGTGCAGGGAAAAGTACAGTAGTGCAGCTATTGTCTCGTTTTTATGAGCCAGCAAAAGGTTGTATAACAGTTGCAGGAGAGGATGTCAGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCTATTGTAAATCAGGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATGATGTTTCCAAAGAGGATGTGATTAAGGCAGCTAAGGCTGCTAATGCTCATGACTTTATAATTTCTCTCCCGCAGGGCTATGATACACTCGTTGGTGAGCGTGGAGGCCTCCTGAGTGGAGGACAAAGGCAGAGAATTGCTATTGCCCGAGCTATCCTAAAGAATGCTCCCATCCTTATATTGGATGAGGCCACCAGTGCCCTGGATGCGGTCAGTGAGCGCCTAGTCCAGGATGCTCTCAACCATTTAATGAAGGGGAGGACGACGTTAGTTATAGCTCACCGGTTGAGCACAGTTCAAAACGCCCATCAAATTGCGCTTATTTCTGAGGGGAGGGTTGCAGAACTAGGCACCCATTTGGAGCTATTGGCTAAGAAGGGCCATTATGCTTCACTAGTCAGCACTCAAAGGCTTGCATTTGAATGA 2262 0.4363 MSFSPLFSSLLFTSPTLRSTQHKLHTTPSSSISMASATLSLFHPLHFPYSHSSSLTRTLNPTTLSRSSLSLLPFSPSSTKLLPLSFNTKNKPTTTTPPRAYVTGPSSDPIFPDQVPKIDGSDSDKANPPKVISWGLLWMLLMKHKLRLSLCLATLLACTTCTLSMPIFSGRFFEVLIGARPEPLWRLLSKIGVLYALEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPILGVLMLAVSISVAVYKRSTFPVFKAHGMAQAFISDCVSETFSAIRTVRSFGGEKRQMFTFANQVLSFQASGIKLGTFKSLNESMTRVAVYISLISLYCLGGSKVKAGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRRSFAAVERINSVLSGVQVDEALAYGLERELKQKAVADENYKLFFSDSSTEKIQKNYLHYMSALKTSSNLFSLAWSGDVCLEDVHFSYPLRPDVEILRGLSLRLKCGTVTALVGPSGAGKSTVVQLLSRFYEPAKGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDDVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARAILKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALISEGRVAELGTHLELLAKKGHYASLVSTQRLAFE* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2969 753 Gene3D ABC transporter type 1, transmembrane domain 120 446 IPR036640 GO:0005524|GO:0016021
Aev05g2969 753 Gene3D - 507 750 IPR027417 -
Aev05g2969 753 CDD ABC_MTABC3_MDL1_MDL2 511 748 - -
Aev05g2969 753 Pfam ABC transporter transmembrane region 150 419 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g2969 753 SMART AAA_5 536 730 IPR003593 -
Aev05g2969 753 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 90 751 - -
Aev05g2969 753 SUPERFAMILY ABC transporter transmembrane region 137 440 IPR036640 GO:0005524|GO:0016021
Aev05g2969 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 509 747 IPR003439 GO:0005524
Aev05g2969 753 ProSitePatterns ABC transporters family signature. 650 664 IPR017871 GO:0005524
Aev05g2969 753 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 90 751 IPR039421 -
Aev05g2969 753 CDD ABC_6TM_TAP_ABCB8_10_like 151 440 - -
Aev05g2969 753 Pfam ABC transporter 527 678 IPR003439 GO:0005524
Aev05g2969 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 748 IPR027417 -
Aev05g2969 753 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 150 432 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2969 Aev-Chr5 30406122 30410897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2969 506 753 Calmodulin-binding Proteins AT2G36910 54.980 4.89e-75 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2969 K05657 - gmx:100791034 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2969 05 30406122 30410897 Aev05g2969 05 30406122 30410897 ECH