Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2967 ATGTTTACATCCAATCATCACCACCACTTTTCAAACACAACACGTCCCATCTCTTCGGAACATTCCTCTTCCTTTCACACGTCATCATCACCAGTGGCCACATTTTCCGATGAGGAGGTGCTTCTGGCGGCGAGCCACCCGAAGAAGCGTGCAGGGAGGAAGAAGTTCAAGGAGACTCGCCACCCGGTTTATAGGGGTGTGAGGAGGAGGAACTCAGGTAAATGGGTGTGTGAAGTGAGAGAACCAAACAAGAAGACAAGGATTTGGCTGGGGACTTTCCCCACTGTGGAGATGGCGGCCCGGGCCCATGATGTGGCCGCTTTTGCCTTGAGAGGCCGGTATGCTTGTCTTAACTTTGCTGACTCGGCGTGGCGGTTGCCTGTTCCCGCCACGTCTGATGCCAAGGCCATCCAGAAGGCCGCTGCAGAAGCTGCAGAGGCCTTCCGACGCGAAACTACGGAAATGGTAAGGGAGGAGCAGGGTTTGTTTTGCATGGAGGAGGAAAATGAAAGACCACTGTTGGAGGTGCCAGAATTGTTGAGGAACATGGTGCTCATGTCCCCAACACATAGCATAGGGTATGAGTATGAATATGCTGACATGGATGTTACTGATGCTGAGGTGTCATTATGGAGTTTTTCAATTTAG 648 0.517 MFTSNHHHHFSNTTRPISSEHSSSFHTSSSPVATFSDEEVLLAASHPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTVEMAARAHDVAAFALRGRYACLNFADSAWRLPVPATSDAKAIQKAAAEAAEAFRRETTEMVREEQGLFCMEEENERPLLEVPELLRNMVLMSPTHSIGYEYEYADMDVTDAEVSLWSFSI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2967 215 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Aev05g2967 215 MobiDBLite consensus disorder prediction 1 30 - -
Aev05g2967 215 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 215 IPR045277 GO:0003700
Aev05g2967 215 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Aev05g2967 215 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Aev05g2967 215 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Aev05g2967 215 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Aev05g2967 215 SUPERFAMILY DNA-binding domain 63 122 IPR016177 GO:0003677
Aev05g2967 215 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 215 - -
Aev05g2967 215 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Aev05g2967 215 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2967 Aev-Chr5 30398985 30399632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2967 16 213 AP2-EREBP Transcription Factor Family AT5G51990 55.310 6.87e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g2967 AP2 7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2967 - - adu:107491210 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2967 05 30398985 30399632 Aev09g2268 09 25262047 25262703 ECH
Aev05g2967 05 30398985 30399632 Aev05g2967 05 30398985 30399632 ECH
Aev05g2967 05 30398985 30399632 Aev09g2268 09 25262047 25262703 PCT