Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2966 ATGTCCGCAGACAGAAGGAAGAGTGTGATGTCTAAGAGCATAGAGAACGGTGCATCACATTTTTTGCTGAAACCCCTTTGTGCTGATGATTTCAGAGACATATGGCAATTTGCTACTCCTGATCCAACCATAGCTAATGATGTTGGAGGTAATCAAATTGTTGTTCATGGTACAAACTCTTCTCAGCCTAGGCAAAAAAGAAAATATACTAAGAGGAACAAGAGTGATAGTCAAATGATTATTAATAATAATAATATGGAAGACCATGATCAAGAAGGAGCATCAAAAAGATCCAAGGTTGTTTGGACAGCAAATCTTCACAATCGTTTTTTGATGGCCATAAGATGTATTGGAGTTGGAAAGATTGTGCCGACGAAAATTCTTGAGGTCATGAATGTGCCATACTTGACCAGAGAAAATGTGGCTAGTCACTTACAGAAGTACAGACTATTTCTGAAGAAAGTTAGAGAGACGGGAATGATTGAGCCCCTATCAGAAAGGGAACTAAGGTCAAGGTTTGCTTCAGAGCTTCCAGTTTCTATGATCAGAGAGATCCAAAAAAGTGGTCAGAACCTAAGCCTCCCAATTCAGAGGTATTTGAAAGGTGAAACACAAAACATTGGACAAGCATGTTCCAATGTTGTTACTACTTCTCAACTTCAAAATCTATTCCAAGGTGGCAATAATGTGATTCAGAATCAGCAAGGGAATCATAGTGATGCATTGAAACAGCTTAGCCTTAGGAATTCAAGCTTTGGAGCCAGGTTGATTGGGGCCAACAATCATGTCCATGGAAATAGCTCATTTGATTCTGATCCTGTTTTTCCAGCATTTGGAATGGAACCTGGAATCTTGACTAGCTCAAATGCATTCAATGGAGGTTCTAAATTTGGTGAACAAATGTTCCAAAACAATGGATTATTGGGGACTCAAGACTTAAGCTATGGTCTTGGAGTTGGCAACACTAATCTGCCATTGAATTCTGCTTTGGATTACAACAACTCTGTTTCCTCTGGAATTCTCAATAATGGCAATAGCTTTGGATTGCTGAATGGAACACAAAATGCTGATGTGAATAATTCTGTGACACCCTTTGCTTTGGGACAAGGAAATTCTGGTTTGGTTCAAGGAGGGTATGCTTCTGATGCTAATAATTTGTATGCAAGAGAATTTGCTGCTCCTTTGGTACCTAATGCAACTCCAGAAGGAAATAATACTTCTGAGATTCTACTTCGGCAATTGGCTCAGCAACTAGGTGGTGGTGCTTTGAATGTTGCAGGAAATGAGATTCAGTTTGATGCAGGAGGTTCAATCAATGAGGACATTGGTAATAACCAAGTGGATGATGAACTTACTAAGCTTTTCTTGTTGCTAGAAGATAAGCAGCTTCTCAATGAGACAGGGGAGAACATAGATGCCAATGAATTTTTTAATTCTGACTTTTCTGGCACCTCTCATGCTCTGCAACTCCCTCAAGAGCAGCCTCAGAAAGCAGGGGATATGATTGTTCCCTCAACTGAAAACAACATGAATCTGCCAAATGAGTCCACAACAACCACTGATAAGAATCCTACTCAGGCAACTCTCATAGTTGTTTTGCCACATTTATTCCAATGTTTCTTCTAG 1626 0.3973 MSADRRKSVMSKSIENGASHFLLKPLCADDFRDIWQFATPDPTIANDVGGNQIVVHGTNSSQPRQKRKYTKRNKSDSQMIINNNNMEDHDQEGASKRSKVVWTANLHNRFLMAIRCIGVGKIVPTKILEVMNVPYLTRENVASHLQKYRLFLKKVRETGMIEPLSERELRSRFASELPVSMIREIQKSGQNLSLPIQRYLKGETQNIGQACSNVVTTSQLQNLFQGGNNVIQNQQGNHSDALKQLSLRNSSFGARLIGANNHVHGNSSFDSDPVFPAFGMEPGILTSSNAFNGGSKFGEQMFQNNGLLGTQDLSYGLGVGNTNLPLNSALDYNNSVSSGILNNGNSFGLLNGTQNADVNNSVTPFALGQGNSGLVQGGYASDANNLYAREFAAPLVPNATPEGNNTSEILLRQLAQQLGGGALNVAGNEIQFDAGGSINEDIGNNQVDDELTKLFLLLEDKQLLNETGENIDANEFFNSDFSGTSHALQLPQEQPQKAGDMIVPSTENNMNLPNESTTTTDKNPTQATLIVVLPHLFQCFF* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2966 541 PANTHER RESPONSE REGULATOR 23-RELATED 1 405 - -
Aev05g2966 541 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 151 IPR006447 GO:0003677
Aev05g2966 541 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 405 IPR045279 GO:0009736
Aev05g2966 541 Gene3D - 94 156 - -
Aev05g2966 541 MobiDBLite consensus disorder prediction 48 94 - -
Aev05g2966 541 SUPERFAMILY Homeodomain-like 95 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2966 Aev-Chr5 30389190 30392706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2966 1 173 Response Regulator Gene Family AT5G07210 36.967 7.57e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev05g2966 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2966 - K14491 aprc:113866677 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2966 05 30389190 30392706 Aev05g2966 05 30389190 30392706 ECH