Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2953 ATGGGGTTTCTCCGGCGACTCTTCGGCGGCGGCAAGAAGCACCACCATCCTCAGCCGCCGCCGGGAACCCATGACGGGTCGGGTCAAAAACCCGGAAAAGAAAAACGGAACTGGAGCTTCGTGAAGCAAAGCACGAGGGATAAATCCAACAATAGCAATAACCGCCGCTATGATCCTTCATCCGCCGCCGACTCATTGGACGCTAACAAGCACGCCATCGCCGTCGCCGCCGCCACTGCCGCCGTAGCTGAGGCCGCTCTTGCTGCCGCCCACGCTGCCGCCCAGGTGGTCAGGCTTACCGGCGGTGGCAGGCCAGCCACGGCGGCGGAGGTTCAGCGGATGCTGGCCGAGGAAATCGCCGCCGTGAAAATACAGTCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAATTACAATCATTGGTGAGAGGCCACATTGTGAGGAAGAAAACTGCTGATATGCTCAAGCGCATGCAGACATTGGTGAGGCTGCAGGCTCGAGCACGTGCAGGTCGCGTGCACTTGTCAGACAATAACAACATGCCTTCTTTCAACTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATGAGCATCCACTTCGTGCCTATAGTACCAAATTTGATGGATCTTCTGTCCTCAAGAGATGCACTTCCAATTCAAATTATAGGGACATTGGCTTAGAGAGAACCCGGTTTGGTTCAAGTTGGAGGGAAGAAAGTGGTTGGAGCCAAACAGGTAATAATGCATCATTGAGAAATGGCCACATTATTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACATGGAAGCCACACTTAAGCTCTCACCACCACCACAATGTGAACCATAATAATATTGTTGCATATGATCAATCTCCATTAAAACATTCTTCAAAAGGTCTAAATCCGAGAACTGCTGAGAATAGTCCACAAGCATTCTCTGCCTCTTATAGACTTGGAAGCAGTGCAAGAAAAGGAGGGCCTTTTACACCAACCAAGAGTGAGTGTTCTTGGGGTTTCTTCAATGGATACTCTAGTCACCCTAATTACATGGCAAATACTGAATCTTCAAGAGCTAAGGTTAGGTCACATAGTGCACCAAGGCAAAGGCTAGAGTTTGATAGATATGGTTCCAATAGAAGGTTTGTTCAAGGTCTTTGGGATGCAGGGCCTAATCTATCCTCAAGCCACTTGAACAGAGTTGGGAGTACTAAGTTAAGGTGA 1257 0.4909 MGFLRRLFGGGKKHHHPQPPPGTHDGSGQKPGKEKRNWSFVKQSTRDKSNNSNNRRYDPSSAADSLDANKHAIAVAAATAAVAEAALAAAHAAAQVVRLTGGGRPATAAEVQRMLAEEIAAVKIQSAFRGYLARRALRALKALVKLQSLVRGHIVRKKTADMLKRMQTLVRLQARARAGRVHLSDNNNMPSFNSSLSHYPVPEDYEHPLRAYSTKFDGSSVLKRCTSNSNYRDIGLERTRFGSSWREESGWSQTGNNASLRNGHIIDDEKSDKILEVDTWKPHLSSHHHHNVNHNNIVAYDQSPLKHSSKGLNPRTAENSPQAFSASYRLGSSARKGGPFTPTKSECSWGFFNGYSSHPNYMANTESSRAKVRSHSAPRQRLEFDRYGSNRRFVQGLWDAGPNLSSSHLNRVGSTKLR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2953 418 Pfam Protein of unknown function (DUF4005) 320 384 IPR025064 -
Aev05g2953 418 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Aev05g2953 418 Gene3D - 117 168 - -
Aev05g2953 418 PANTHER IQ-DOMAIN 5-RELATED 1 314 - -
Aev05g2953 418 MobiDBLite consensus disorder prediction 28 42 - -
Aev05g2953 418 SMART iq_5 116 138 IPR000048 GO:0005515
Aev05g2953 418 SMART iq_5 139 160 IPR000048 GO:0005515
Aev05g2953 418 PANTHER CALMODULIN-BINDING PROTEIN 311 404 - -
Aev05g2953 418 PANTHER CALMODULIN-BINDING PROTEIN 1 314 - -
Aev05g2953 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 162 IPR027417 -
Aev05g2953 418 MobiDBLite consensus disorder prediction 1 63 - -
Aev05g2953 418 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Aev05g2953 418 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Aev05g2953 418 PANTHER IQ-DOMAIN 5-RELATED 311 404 - -
Aev05g2953 418 MobiDBLite consensus disorder prediction 43 60 - -
Aev05g2953 418 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2953 Aev-Chr5 30257290 30263196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2953 1 383 IQD Protein Family AT5G07240 46.154 2.11e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2953 - - gmx:100785181 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2953 05 30257290 30263196 Aev05g2953 05 30257290 30263196 ECH