Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2947 ATGGCTCCGCTGCCGCCGGTGGAAAATAATGGAGACTCCTCCGCCGCTGCTGCGGAGTCTCAGAGATCCATTCCGACGCCGTTCCTCACCAAGACCTACCAGCTCGTCGAGGACCAATCCATCGACGATGTCATCTCATGGAACGACGACGGATCCACCTTCATCGTTTGGAACCCTACCGTCTTCGCCAGGGACCTCTTACCTAAGTATTTCAAGCACAACAACTTCTCCAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGAAAAGTTGTACCTGATCGGTGGGAATTCTCGAACGACTGCTTTCGCCGGGGAGAGAAGCGGCTCCTCTGCGAGATTCAGCGGCGGAAGATCTCCTCGCCGTCACCTACGCCGTCACCGACGGCCGCTGCTGTTGCGGCCGCGACGCTGGCGGTTCCTTCTCCGATGCCGTTGACCGCCATACCTACGGCTATGCCGATCATATCGCCGTCGAACTCCGGCGAGGAGCAGGTTATATCGTCCAGCTCGTCTCCGTCGCGAGCTCCGGCGGAGCTCATCGACGAGAACGAGAGGCTGAGGAAAGAGAACGTTCAGCTCACGAAGGAGCTCGCGGAGATGAGATCGCTCTGCAACAACATATTCACTCTGATGTCGAATTACGCCAACACCAGCACAACCACCGCCACCGTTACCAATAACAGCAACAACAGCAACCAGATCGATGGGAGCGCACAAGGAAGCAGAGATTCCGCCTTCACCGCGGTGAAGCCACTCGATTTGATGCCGGTAAAGCGGAGCTCCGGCGAGGAGCCGGCAACAGAGACGGTGGCCATGGCGATGACGGTGGAGGAGATGAATCCGAAGCTTTTTGGTGTGGCTATTGGAGCGAAGCGCGCTAGAGAAGGAGGTGGCGGTGGTGGTGGTGGTGGTGGAGAAGGAGAGGATGATACGCTGTTGCGCCTTCACCAGCCTGGTCACGCGGACGTGAAATCAGAGCCGTTGGATTGCCAGAACCATCGCGATAGTAGTAATCAGGAGACGCCGTGGCTGAACCAGTGCCACAGAGCAAATCAAAGAGTTTGCAATTGA 1074 0.5689 MAPLPPVENNGDSSAAAAESQRSIPTPFLTKTYQLVEDQSIDDVISWNDDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKISSPSPTPSPTAAAVAAATLAVPSPMPLTAIPTAMPIISPSNSGEEQVISSSSSPSRAPAELIDENERLRKENVQLTKELAEMRSLCNNIFTLMSNYANTSTTTATVTNNSNNSNQIDGSAQGSRDSAFTAVKPLDLMPVKRSSGEEPATETVAMAMTVEEMNPKLFGVAIGAKRAREGGGGGGGGGGEGEDDTLLRLHQPGHADVKSEPLDCQNHRDSSNQETPWLNQCHRANQRVCN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2947 357 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g2947 357 MobiDBLite consensus disorder prediction 295 342 - -
Aev05g2947 357 MobiDBLite consensus disorder prediction 310 334 - -
Aev05g2947 357 MobiDBLite consensus disorder prediction 159 177 - -
Aev05g2947 357 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g2947 357 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g2947 357 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g2947 357 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g2947 357 MobiDBLite consensus disorder prediction 159 178 - -
Aev05g2947 357 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 12 342 - -
Aev05g2947 357 Coils Coil 184 204 - -
Aev05g2947 357 Gene3D - 20 118 IPR036388 -
Aev05g2947 357 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g2947 357 SUPERFAMILY "Winged helix" DNA-binding domain 25 117 IPR036390 -
Aev05g2947 357 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 342 IPR027725 -
Aev05g2947 357 MobiDBLite consensus disorder prediction 225 244 - -
Aev05g2947 357 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2947 Aev-Chr5 30214490 30215675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2947 5 357 HSF AT5G62020 45.946 1.15e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev05g2947 HSF_DNA-bind 1.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2947 K09419 - gmx:100812267 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2947 05 30214490 30215675 Aev05g2947 05 30214490 30215675 ECH