Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2944 ATGAAGATCATCATCATCATCAATTTCCTCGAACATTGCCACTTCATCACTACCCTGTTCCTCTTTTCATCGTTCTCTCTGTTTTCAAGTATAGCTGCTCAAGCGGCTGCACCGGTGGCACCCGAGGTTCCACGAACACTGAGCGATAACGCGAACCCCTCACTCGCGATCCTCTTAGTGATTCTCATCTTCGCCTTCTTCATCACTGGGTTCTGCTCCATCTACATTCGCCACTGCTCCGAGCAATACGTGGTTTCCGGCACCACCATTGTTCCACGTGGCATCGACCCGGAGGTTCTATCCACGTTCCCCATCATGGTGTATTCCACCGTTAAGAACCTCAAAACGGGTCACAACGTCGCGCTTCAGTGTGCTGTGTGCTTGAGTGAGTTCAAGGAATCTGACAAGCTGAGATTGTTGCCCAAGTGCTGTCACGTGTTCCACCCGGACTGTATCGACGCGTGGCTCGCCTCGCACGTGACGTGCCCGGTCTGCAGGGCGAAGCTGAAGCCGGAAAATGCGGAGTTCAAGGTCGAAATTGGGGAGGTTGGAAGTGCCGACCAAGTGTTTGACGAAAGTTCTGAGAGAAGAGGGGAAGTTTCTTGTGAGGGGAGCGAAGGTGGGGTTGTTGGGGGAGTTGATGGGTCTTCAAAGGTGAAAGGTTTTGGTGTTTTAGCGAGGTCGCATTCAACGGGTCATTCTCTGGTTGATCCAGGGAAGAGCTTTGAGAGGTTCACATTGAGATTGCCTGAGGAAGTGAGGAAGCAGATTCTTGATGAGAATAACAACAGTAAGTGTGGTGGGAAGATGAAGCGTTCTGCTAGCTACGACGTCGTTTGGCAGAGCGGTGAAGTTGGTGGTGTTGAAGGTAGTAGTAGTAGTAGTAAGGAGAAGAGTAATAGTAATAACAGGTGGGTGCTGTCGATGACGCCACCCTTTGTTACTCGAGGTTGGGGTTCTTCTACTTCTTCGGGTTTGTCTCCTCCTAATGAGTGCACTACTTGCTCTGGGATTCCCAGGTTTTGGGCTTCTTCTGCTGCTGCTGCTGCAGCAACAAGAGAAGAGAAAGAATTTGAAGGGAGAACGGTTTTGCAAATTGTGTGA 1104 0.5045 MKIIIIINFLEHCHFITTLFLFSSFSLFSSIAAQAAAPVAPEVPRTLSDNANPSLAILLVILIFAFFITGFCSIYIRHCSEQYVVSGTTIVPRGIDPEVLSTFPIMVYSTVKNLKTGHNVALQCAVCLSEFKESDKLRLLPKCCHVFHPDCIDAWLASHVTCPVCRAKLKPENAEFKVEIGEVGSADQVFDESSERRGEVSCEGSEGGVVGGVDGSSKVKGFGVLARSHSTGHSLVDPGKSFERFTLRLPEEVRKQILDENNNSKCGGKMKRSASYDVVWQSGEVGGVEGSSSSSKEKSNSNNRWVLSMTPPFVTRGWGSSTSSGLSPPNECTTCSGIPRFWASSAAAAAATREEKEFEGRTVLQIV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2944 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 172 IPR013083 -
Aev05g2944 367 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Aev05g2944 367 MobiDBLite consensus disorder prediction 286 306 - -
Aev05g2944 367 SMART ring_2 124 165 IPR001841 -
Aev05g2944 367 Pfam Ring finger domain 123 166 IPR001841 -
Aev05g2944 367 SUPERFAMILY RING/U-box 117 171 - -
Aev05g2944 367 PANTHER RING FINGER DOMAIN-CONTAINING 15 290 - -
Aev05g2944 367 CDD RING-H2_PA-TM-RING 123 166 - -
Aev05g2944 367 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 15 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2944 Aev-Chr5 30188629 30189732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2944 16 316 Rapid Response to Elicitors AT3G05200 38.199 4.57e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2944 K10664 - gmx:102665105 225.713