Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2943 ATGGCTCAACTTCATCTTAACCTCATCATTCTTTTCTTCTTCCTACTTCTCCATGGTGGTGTTGATGCACAATCATCCATGGAACCTGTTCCAACTTACATCAACCATCATACTTGGGAACCTTCCTTTGCGATCACCTTAGGAGCTGTCATATGCGCCCTTCTCTTCATGGGGATCATCACAATCTACGTCCGAAAATGTGCTCAATCACACACCATCAGCACCAACAGAGCCAGTAACACAACATCATCATCAGAATGTTCATGTTCTTGTTCACAAGGCATCACCAAGGAACTCCTCAACACTTTCCCAATCCTCTTCTACCCAACCATCAAGGACCACAAGATAGGAAAAGGGTCATTGGAATGTGCCGTTTGCTTAACCGATTTCAAGGACTGTGATACACTAAGGTTGCTACCAAAATGCAATCACGTGTTCCATCCTCAATGCATAGACTCGTGGCTCTGTTCTCACGTGACATGCCCTGTTTGTCGCGCGAATCTGAACCAGGATTCATGCGAAGCTGCCGTAACAGTTCCAACCCAATTGAACACATCCCAAGGGGGTGATGAGAGTTCAGGAACCGAAGCTGAACAACACAACGGTAGTGGTGAAGAGAGCGAGGTGGAGCAAAACCAGGCCGAGGAAAACGAGGTTCATGTGAAAATTGATGATGGGGTTGCTCCAAAATCGAAGCTTTTGAGGTCGAATTCAACGGGACACTCTTTCATGGAACAGAGTAAGAGTGAAGAGACTCAGGAGAGGTTCACGCTGAGGTTACCAGAGGATGTGAGGAGGTACATTCTGGTGAACAGTGGTGGAAGGGTGCATCGTTCCGCCAGCTACAACAACAACAACAATAGCAGCAATATGGTGAGAGGGATGTGTTGGAGTGACAGTGAAGGTAGCAGCAAAGGGAAGAACTTGTGGGTGCTTTGGAGCCGTGGTTAG 951 0.4721 MAQLHLNLIILFFFLLLHGGVDAQSSMEPVPTYINHHTWEPSFAITLGAVICALLFMGIITIYVRKCAQSHTISTNRASNTTSSSECSCSCSQGITKELLNTFPILFYPTIKDHKIGKGSLECAVCLTDFKDCDTLRLLPKCNHVFHPQCIDSWLCSHVTCPVCRANLNQDSCEAAVTVPTQLNTSQGGDESSGTEAEQHNGSGEESEVEQNQAEENEVHVKIDDGVAPKSKLLRSNSTGHSFMEQSKSEETQERFTLRLPEDVRRYILVNSGGRVHRSASYNNNNNSSNMVRGMCWSDSEGSSKGKNLWVLWSRG* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2943 316 MobiDBLite consensus disorder prediction 213 229 - -
Aev05g2943 316 PANTHER RING FINGER DOMAIN-CONTAINING 4 199 - -
Aev05g2943 316 PANTHER RING FINGER DOMAIN-CONTAINING 198 287 - -
Aev05g2943 316 SUPERFAMILY RING/U-box 117 171 - -
Aev05g2943 316 MobiDBLite consensus disorder prediction 183 200 - -
Aev05g2943 316 Pfam RING-like zinc finger 122 151 IPR001841 -
Aev05g2943 316 CDD RING-H2_EL5_like 122 165 - -
Aev05g2943 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 172 IPR013083 -
Aev05g2943 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 199 - -
Aev05g2943 316 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Aev05g2943 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 198 287 - -
Aev05g2943 316 SMART ring_2 123 164 IPR001841 -
Aev05g2943 316 MobiDBLite consensus disorder prediction 232 246 - -
Aev05g2943 316 MobiDBLite consensus disorder prediction 183 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2943 Aev-Chr5 30179614 30180564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2943 7 269 Rapid Response to Elicitors AT3G05200 37.500 1.08e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2943 K10664 - gmx:100782532 286.189