Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2913 ATGGACGCAACACCGTCCACGCTCACCGGCCTCCTCCGCCACGCCGCCGAGAGGTTCCCTTCCCGCCGCGCCGTCTCCGTCGCCGGAAAATTCGACCTCACCCACTCCAACCTCCACCGCCTCGTAGAAATCGCCGCCGCACGACTCATCTCCGCCGGAATCAAGCCCGGTGACGTCGTCGCCCTTACCTTCCCCAACACCGTCGAGTTTGTTATAATGTTTTTAGCAGTAATTCGGGTTCGAGCCACGGCGGCGCCACTAAACTCAGCATATACATCGGAAGAGTTCGAGTTTTATTTATCGGACTCAGAATCAAAGCTTCTAATAACTTCTTCAGACGGAAACAAGCCGGCTCAAGCCGCGGCTTCCAAGCTCAACATCCGTTGCGCCTCGGCTTCGCTAACTCAAGCCGAAGCTGAAGCCGAACAAGCCAAGCTCACCTTCGAGTTAAGCCACCACGTGAACTCAGAGACAAACTCGGAGCCGGACTCGGTCACCGGAATCATCAACGATCCATCCGACGTGGCACTCTTCCTCCACACCTCAGGCACCACGAGTCGCCCCAAGGGCGTTCCACTGACTCAGCACAACCTAGTTTCCTCCGTACGGAATATCGAATCGGTGTACCGACTCACTGAGTCCGACTCGACGGTGATCGTTCTCCCGCTCTTCCACGTCCACGGTTTAATCGCAGGGTTACTGAGCTCACTCGGCGCCGGAGCCGCCGTGGCGTTGCCGGCGGCAGGGAGATTCTCGGCGTCGACGTTCTGGAAGGACATGCTTAAGTACAACGCAACGTGGTACACAGTGGTTCCTACCATACACCAGATCATACTAGATCGCCACCAGAACAATCCCGAACCGGTTTACCCGACGCTCCGGTTCATTCGTAGCTGCAGCGCGTCGCTGGCACCGGCTATACTAGGTCGGTTAGAGGAGGCTTTCCGGGCCCCGGTTTTGGAGGCTTACGCGATGACGGAAGCGTCTCATCTAATGGCATCGAACCCGTTGCCGCAAGATGGGCCGCACAAGCCCGGGTCGGTTGGGAGGCCCGTGGGCCAAGAGATGGCTATTTTGGACGAAACGGGTCGGGTTTTGGAGGCTGAGATGAACGGCGAGGTTTGTATCAGGGGGCCGAATGTGACGAAAGGGTACAAGAATAACCCGCAGGCTAATACGGCGGCGTTTCAGTTTGGGTGGTTCCATACGGGTGATTTAGGGTTCTTTGATTCCGACGGGTATTTGCATCTCGTCGGTCGGATCAAGGAGCTTATTAACCGAGGAGGAGAAAAAATATCACCAATAGAAGTGGATGCTGTGCTCCTATCTCACCCGGACATTGCTCAAGCAGTTGCTTTCGGAGTTCCAGATGACAAGTATGGAGAGGAGATAAATTGTGCAATCATCCCAAGAGAAGGATCAAACGTTGATGAGGCAGAGGTGCTAAGATATAGCAAGAAGAATCTGGCATCGTTCAAAGTCCCCAAGAAGGTCTTCATCACTGATTCTCTGCCCAAGACTGCCACTGGCAAGATTCTGAGGCGTTTAGTAGCAGAGCACTTTGTTTCTCAAAGCTGA 1578 0.5482 MDATPSTLTGLLRHAAERFPSRRAVSVAGKFDLTHSNLHRLVEIAAARLISAGIKPGDVVALTFPNTVEFVIMFLAVIRVRATAAPLNSAYTSEEFEFYLSDSESKLLITSSDGNKPAQAAASKLNIRCASASLTQAEAEAEQAKLTFELSHHVNSETNSEPDSVTGIINDPSDVALFLHTSGTTSRPKGVPLTQHNLVSSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASTFWKDMLKYNATWYTVVPTIHQIILDRHQNNPEPVYPTLRFIRSCSASLAPAILGRLEEAFRAPVLEAYAMTEASHLMASNPLPQDGPHKPGSVGRPVGQEMAILDETGRVLEAEMNGEVCIRGPNVTKGYKNNPQANTAAFQFGWFHTGDLGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNVDEAEVLRYSKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2913 525 PANTHER OXALATE--COA LIGASE-LIKE 5 524 - -
Aev05g2913 525 Gene3D - 421 523 IPR045851 -
Aev05g2913 525 CDD FACL_fum10p_like 20 519 IPR045310 GO:0016874
Aev05g2913 525 Pfam AMP-binding enzyme 13 427 IPR000873 -
Aev05g2913 525 SUPERFAMILY Acetyl-CoA synthetase-like 3 523 - -
Aev05g2913 525 Pfam AMP-binding enzyme C-terminal domain 436 511 IPR025110 -
Aev05g2913 525 PANTHER ACYL-COA SYNTHETASE 5 524 - -
Aev05g2913 525 Gene3D - 3 420 IPR042099 -
Aev05g2913 525 Coils Coil 127 147 - -
Aev05g2913 525 ProSitePatterns Putative AMP-binding domain signature. 178 189 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2913 Aev-Chr5 29959874 29963783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2913 2 524 Monolignol Biosynthesis Gene Families AT4G05160 30.899 8.86e-61 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2913 K22133 - gmx:100779306 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2913 05 29959874 29963783 Aev05g2913 05 29959874 29963783 ECH