Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2910 ATGGATGAACATTCAAATGGGGAAATTTCAATGGAGGAAAATGTTGATTTACTTGATCAGATTGTTAGCGAAAAGATGCTTGAGGTCCATAATAGCTGTTCAATTGAGAAGGGAGAGTATCCACAGACGGGAATGCGATTCATTTCAGATCACGATGCAAATTTGTTTTATTCAAACTATGCAAAGAAAGTTGGATTTTCTTGTAGAACACGTTCCTCTAAGAAAGATGCTGATGGAACAATCAAACAAAAAACATATACATGTGGCAGAGAGGGTACAAGGGGGTCTGCTGCTGCCAGTTTGGAGAAGAACAAACCCATATCAGCAGCAAATTGCAAGGCAAGGATGGTGGTCAGACTTGACAGAGATTGGTCAAATGCATCATACAAGGTTGTTGATCTGAACAAGTTTAATGGCATTGCTAAGAGAAAGGAGTATGAAGTAGTGTATGATTCTGTTTCAATTGACATTAAATGTCAATGTTTAATGTTTGAATCACGTGGTATTATGTGTCGCCATTCACTTTGTGTTCTGGGGCAAGAATCTGTTGAAAAAGTTCCAGAAAAATACATTTTGGAACGATGGAGCAAAAATGTTCAACGTAAGCACTCAAATATAAAGTGTAGTCATGACTCAAGCCGCTCGGAGCCAAGCAAGATGCGCTATAATGATCTGTGCTCACACTTTTACAATGTGGCTGAAGCATTTATTGATTCTGATGAGGCTGCTGGCATTATGCACCGTGCGTTGGATGCTGCGGTGGTTGAAATTGGTTCACATTTTGCTGAAAAAGTAAGTGATTGCCATGAGAAAAGTAAAGAAAATGAAATTGGGAACATACATGCACCTCCATTTGCTACTACACGTGGAAGATCGTCCAACAAAAGGAAACAATCAGTTTTTGATGAGAAATTAACCAAAAGAGCAAAGGCAGACAAGAGAAAGAAAAAAAAGATAGCTGAACAGCAATTTGAGGATTCTTCAATTGACAACATGACACCTACTCCACTACATCTGCCTTCTCAAGTTGGTGTTGGTTCATTTACAACATTATTATATTCCTTTGCACTTACACAGCTACCAGTACCACACGACCCTCCAAGTGATGCTTAA 1113 0.3899 MDEHSNGEISMEENVDLLDQIVSEKMLEVHNSCSIEKGEYPQTGMRFISDHDANLFYSNYAKKVGFSCRTRSSKKDADGTIKQKTYTCGREGTRGSAAASLEKNKPISAANCKARMVVRLDRDWSNASYKVVDLNKFNGIAKRKEYEVVYDSVSIDIKCQCLMFESRGIMCRHSLCVLGQESVEKVPEKYILERWSKNVQRKHSNIKCSHDSSRSEPSKMRYNDLCSHFYNVAEAFIDSDEAAGIMHRALDAAVVEIGSHFAEKVSDCHEKSKENEIGNIHAPPFATTRGRSSNKRKQSVFDEKLTKRAKADKRKKKKIAEQQFEDSSIDNMTPTPLHLPSQVGVGSFTTLLYSFALTQLPVPHDPPSDA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2910 370 ProSiteProfiles Zinc finger SWIM-type profile. 146 182 IPR007527 GO:0008270
Aev05g2910 370 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 139 312 - -
Aev05g2910 370 MobiDBLite consensus disorder prediction 275 335 - -
Aev05g2910 370 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 11 125 - -
Aev05g2910 370 SMART 26again6 157 184 IPR006564 GO:0008270
Aev05g2910 370 Pfam FAR1 DNA-binding domain 56 136 IPR004330 -
Aev05g2910 370 MobiDBLite consensus disorder prediction 295 309 - -
Aev05g2910 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 139 312 IPR031052 GO:0006355
Aev05g2910 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 125 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2910 Aev-Chr5 29898254 29901244 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev05g2910 FAR1 2.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2910 - - ahf:112778726 142.124