Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2906 ATGCCAGAACCAGGTGAAGAAAATTCTGAACTTCCTTCCAAGTCAAAGCCACATGAAGAACATGGTTTTTCCATGGATTTTGATATATTCCTTGAAAGTTCATGGCCCTTTGATCACATCACTCCTACCTCCAACCCCATGTCTCCTTTTCTCATACCAACCTCTTCTGAGCAACCTTTTTCTCCTCTCTGGGCTTTCTCTGATGTTGAAGATGAAAACAAGCATGTTAGAATTGAAGGTGATACAAACACAGTAACTGAAAATCCAGTTGAAAATGATGACAGCAATAAACTCGTGCCGCCGGTTGTGCCTCTGCCAGCCGTAAAAAGTACAGACGGTTACTTTCTAATTAAGGAAAGAATGACACAAGCACTTCGCTACTTCAAAGAGTTGACTGAACAGAATTTTCTTGCTCAGGTTTGGGCACCTGTGAGGAATGGGAACCGGTATGCTCTAACAACTTCAGGCCAACCCTTTGTTCTTGATCCGCGTAGTAATGGACTCCATCAGTATAGAACAGTCTCCCTGATGTATATGTTTTCCGTGGATGGGGAGAACAACGAAATCCTGGGACTCCCGGGTAGAGTCTTCCAGCAGAAATTACCCGAATGGACTCCGGATGTTCAATATTATTCTAGTAGAGAGTATTCGCGCCTAAATCATGCTCAGCATTACAATGTTCATGGTACCTTGGCTTTGCCTGTGTTTGAACCTTCAGGACAGTCATGTGTTGGTGTGCTGGAGTTGATAATGACTTCAAAGAAGGTTAACTATGCTCCTGAGGTTGATAAAGTCTGCAAAGCCCTCGAGGCTGTAAATTTGAGGAGTTCAGATATTTTGGAGCATCCATACACTCAGATTTGTAATGAAGGTCGGCAGAATGCATTAGCCGAGATTTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTGCCTCTTGCCCAAACATGGGTTCCGTGTAGGCACCGGAATGTTTTAGCTCACGGTGGTGGCCTTAAGAAAAGCTGTTCTAGTTTTGATGGTCACTGCATGGGGCAAGTTTGCATGTCTGCATCTGACGTAGCGTTCTATGTCATCGATGCTCATACGTGGGGTTTCCACGAGGCTTGTGCTGAGCATCACTTACAACAAGGTCAAGGGGTTGCTGGGAGGGCATTTTCATCCCACAACATGTGCTTCTGTGGGAACATAACTCAGTTCTGCAAAACTGATTATCCATTAGTACACTATGCTCTCATGTTCGGGTTAACCAGCTGTTTTGCAATCTGTTTACAAAGCTCTCATACTGGAGGTGATGATTATGTATTAGAGTTTTTTCTGCCTCCTAAGATCACAAACTTTTATGAACAAAAGGCTTTGTTGGGGTCCATATTGGCAACTATGAAGCAGCACTTCCAGAGTCTCAAGATTGCAGCTGGCATTGAACTTGAGGAGGATTATTCAATTGAAGTTATAGAAGCATTAAATGAAAGAATTCATTTGAGCCTCGAATCTATTCCGATTTCGCAGTCTGCTAGATCACCACCTAGACTTGATGCCTCACCAAATAAGAGTGAGGGAGTGCCACAAGGTCCATCAGAGCAGCAGATTATGACACACTTTGATGAAATAAATGATGGAGGGAATCTTGGCGATAATGCAGGCGGAAGCACCGATCGGGTCTCTTCCTTAGATACTAAAACCAAAAAGAAACCCTCAGAAAGAAAGCGTGGAAAAGCTGAGAAAACAATTAGTCTTGAAGTTTTGCAACGTTATTTCTGCGGGAGTCTTAAGGATGCTGCTAAGAGCCTTGGTGTTTGCCCAACTACGATGAAGCGCATCTGCAGGCAGCACGGGATATCCCGGTGGCCATCTCGAAAGATCAACAAAGTTAACCGATCATTGTCTAAGCTCAAGTGTGTAATGGAATCAGTTCAAGTTGCTGAAGGAGCATTTGGTTTGAATTCTTCAAGCAAGAGTTCACTTCCCATTGCGGCTGGTTCCTTTACCGAGCCTTCTACTTCAAAAATGTTCCCATCAAGCATTAGGCCATCAGAACCTCACATGAATGAAAGTGAGTTTGATATCTCAAGAGCATCAAAAACAAAAGATCAATTGCTAGGAAGGACACAAAGTCCTGAGAAGGTGATTGATGAAGAAGGTAGGTCCATTCAGGAGGCTGGTAGTAAAGGCAGATCGCGTGACGGGTTTAGAAATGGGAGCAACTCGAGTGAAGATAGTGCAAAAAATCCTAATCCTCATGGTTCATTCCATGGAAGTAGTCCCCCAAATGAAAGTTCACCTTCAAAAGACATACTTGGAACATTCAACAAAGAGCAATATCTTTTGTTAAGGGGTTCAATGGAGTCAATAATGCAGCCACCTAATACACTAAACTATGCAACTCCATATACTGTTCTCAATGTGGAGGCAACAGAACCACAAGAACCATTTGGAAGAATGCTAATTGAGGGTGTTGGTAGTTCTAAAGACTTGAGAAATCTGTGCCCTTCAGCAGATGCTGTTTTGGAGGACCAGGATAATCCTCAATTTCCTGATTTGGCTCCTAAGCAATGCATGGATACTAGTCTCAATAACAGCACTATGACACCTTTTGCAGCTAGTAAAGAGATGAAGAGTGTGACAATTAAGGCAACTTATAGAGAAGATATCATAAGGTTTAGGGTGTCTTTGAACTGTGGCATTGTGGAATTGCAAGAAGAAATTTCCAAGAGGTTGAAACTAGATGTGGGTGCATTTGACATCAAGTATCTTGATGATGATAATGAATGGGTTCTGATATCATGTGATGCAGACCTGCAAGAGTGTATGGACATTTTAAGATCATCAGGAAGCAACATGATCAGGCTTGTTGTGCATGATTTAGTGTCCATTCTTGGAAGCTCTTGTGAGAGCTCTGGGGATTAA 2910 0.4268 MPEPGEENSELPSKSKPHEEHGFSMDFDIFLESSWPFDHITPTSNPMSPFLIPTSSEQPFSPLWAFSDVEDENKHVRIEGDTNTVTENPVENDDSNKLVPPVVPLPAVKSTDGYFLIKERMTQALRYFKELTEQNFLAQVWAPVRNGNRYALTTSGQPFVLDPRSNGLHQYRTVSLMYMFSVDGENNEILGLPGRVFQQKLPEWTPDVQYYSSREYSRLNHAQHYNVHGTLALPVFEPSGQSCVGVLELIMTSKKVNYAPEVDKVCKALEAVNLRSSDILEHPYTQICNEGRQNALAEILEILTVVCETHNLPLAQTWVPCRHRNVLAHGGGLKKSCSSFDGHCMGQVCMSASDVAFYVIDAHTWGFHEACAEHHLQQGQGVAGRAFSSHNMCFCGNITQFCKTDYPLVHYALMFGLTSCFAICLQSSHTGGDDYVLEFFLPPKITNFYEQKALLGSILATMKQHFQSLKIAAGIELEEDYSIEVIEALNERIHLSLESIPISQSARSPPRLDASPNKSEGVPQGPSEQQIMTHFDEINDGGNLGDNAGGSTDRVSSLDTKTKKKPSERKRGKAEKTISLEVLQRYFCGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKCVMESVQVAEGAFGLNSSSKSSLPIAAGSFTEPSTSKMFPSSIRPSEPHMNESEFDISRASKTKDQLLGRTQSPEKVIDEEGRSIQEAGSKGRSRDGFRNGSNSSEDSAKNPNPHGSFHGSSPPNESSPSKDILGTFNKEQYLLLRGSMESIMQPPNTLNYATPYTVLNVEATEPQEPFGRMLIEGVGSSKDLRNLCPSADAVLEDQDNPQFPDLAPKQCMDTSLNNSTMTPFAASKEMKSVTIKATYREDIIRFRVSLNCGIVELQEEISKRLKLDVGAFDIKYLDDDNEWVLISCDADLQECMDILRSSGSNMIRLVVHDLVSILGSSCESSGD* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2906 969 ProSiteProfiles RWP-RK domain profile. 562 645 IPR003035 -
Aev05g2906 969 Gene3D - 871 955 - -
Aev05g2906 969 ProSiteProfiles PB1 domain profile. 874 956 IPR000270 GO:0005515
Aev05g2906 969 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g2906 969 MobiDBLite consensus disorder prediction 729 766 - -
Aev05g2906 969 Pfam PB1 domain 875 955 IPR000270 GO:0005515
Aev05g2906 969 MobiDBLite consensus disorder prediction 557 574 - -
Aev05g2906 969 MobiDBLite consensus disorder prediction 649 681 - -
Aev05g2906 969 PANTHER PROTEIN NLP8 6 968 IPR045012 GO:0003700
Aev05g2906 969 MobiDBLite consensus disorder prediction 707 727 - -
Aev05g2906 969 SUPERFAMILY CAD & PB1 domains 869 959 - -
Aev05g2906 969 SMART PB1_new 874 956 IPR000270 GO:0005515
Aev05g2906 969 Pfam RWP-RK domain 577 625 IPR003035 -
Aev05g2906 969 MobiDBLite consensus disorder prediction 682 696 - -
Aev05g2906 969 MobiDBLite consensus disorder prediction 504 574 - -
Aev05g2906 969 MobiDBLite consensus disorder prediction 520 536 - -
Aev05g2906 969 MobiDBLite consensus disorder prediction 649 766 - -
Aev05g2906 969 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 6 968 - -
Aev05g2906 969 CDD PB1_NLP 875 955 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2906 Aev-Chr5 29852840 29856780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2906 251 969 NLP Transcription Factor Family AT4G24020 51.962 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev05g2906 PB1 2e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2906 - - gmx:100780901 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2906 05 29852840 29856780 Aev09g2217 09 24871521 24875586 PCT