Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2903 ATGGCTCCGAAGCCCCCAAGTACGGGTCTTTTCGTTGGATTGAACAAGGGTCATGTTGTCACCAAGAAGGAGCTGCCTCCACGACCCTCTGATCGCAAGGGGAAAACAAGCAAGCGGGTGCACTTTGTGAGGAACCTCATTCGCGAGGTTGCTGGTTTTGCGCCTTATGAGAAGCGAATTACTGAGTTGCTTAAGGTTGGAAAGGATAAGAGGGCATTGAAAGTTGCCAAGAGGAAGCTCGGAACCCACAAACGTGCTAAGAAGAAGAGAGAGGAGATGTCCAACGTCCTCCGAAAGATGAGGTCTGGTGGAGGTGGTGATAAGAAGAAGTAA 333 0.5015 MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSGGGGDKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2903 110 MobiDBLite consensus disorder prediction 87 110 - -
Aev05g2903 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev05g2903 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev05g2903 110 MobiDBLite consensus disorder prediction 1 37 - -
Aev05g2903 110 MobiDBLite consensus disorder prediction 79 110 - -
Aev05g2903 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev05g2903 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Aev05g2903 110 Gene3D 60S ribosomal protein L36 2 105 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2903 Aev-Chr5 29837213 29838179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2903 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 1.46e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2903 K02920 - gmx:100785591 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2903 05 29837213 29838179 Aev09g2216 09 24865477 24866328 ECH
Aev05g2903 05 29837213 29838179 Aev05g2903 05 29837213 29838179 ECH