Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2901 ATGCCTGCTATTGATGCAAAACCGAGGGGTTCTGACGGCAGTTTAGATTTGATGAAATCGGATTCGGATGGCAAAGTAGAAACCATAGTCAGACATACGTTTGGCAGAGAACCCTTTTTCTCTTTCCCTGCAAGAGCTGACAACCCTGTTCAGTGGATTCAATTACTTCATGCTTTGGATCAGCAAGGTGTTAGCAGCACTTTTTCAGAACTTCCAGGGTGGCCTTTGCTCTATCCACTGAAGATTCAGTTGCAAAAATGTGACAAATGTCCTCGAGAGTTTTGCTCCTCCATTAATTATAGAAGACATGTACGCGTGCACCACCGGTTGAAAAAGCTTGACAAGGACTCAACAAAAAACAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTGTTGAAGAGGCAAAGGAAGTTGTATCATTGAAAGATGTGATGCTAGAGGGAGTTCCAGGATCTTTAATTTCAGAAGCTCTCACAACTCTTATTCAAAGACCTGGATTTTCTCCATTGCCACACTATTATCTGAGGGCTGGTGCTGCCCTTCTGGATATTGTTCAATCCAAACCTTCCAGTTTCCCATTATCTTCCCAGGAATTGTTCAGTATCCTTGATGATGCCAGTGAAAAAACATGTTTATGTGGGACAGCAGTATCGATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAAGTTGGTCTTGAACCAAAAAATTTAGTGGCCTGCACTAGTTTCTTGCTAGAACAGAAATTGGTGAATGCATGGCTTGCAGACAAGGATGCTGAAGCCTTAAGGTGCCATAGGCAGCTTGTGGAGGAGGAAGAAGCTGCTCAGAGAAGGCAAGCTGAGATATTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAGGACCAGAAAACAAGGGAACATAGGCATGAGGAAGAATTTAAGCGGAACATTGACAGCACTGTGGATGCCTTATCAGCAGCAGACACATCTTTGGTTACCTGTGATTTGGAAGCACATGATCCAGAGACATTTGCAGATAGCACTCCTTCACATGCTCTGCTCCAATTCCCTGACACTAATGAAGGAACAGATGGGAATGTTCATTCAGAGTATGATTTTGGCATGGATCAGTATATTGAGCAGGCATCAGCACGCCGACAGAATCGTCGACGCGCAGCAGCTGCCAGACGGCAGGGGCTGCCAAAACCACAATGGGCTGTAGCCAATGGGTTGCATGAATGCCAGAATTCACCAATTTCAAAGATTGAAGTCATTCAGAAAGATGAGACCCATTGTGATCAGAGGGCAGCTACTATCGTCAATGGTAGTAAAGTGTGGAGTCGAAAGTCGAAACCAGAAATTGACAGGATGGTTTCAGAATCCAGAGTAGAGAAAGAACCAGACCAAGTTAATAATCATGAAGTCCTGATAGGATCTATCTCTATTTCTTTAGGCAATTGCAGCCAACCAGAGGGTATTGCAGTGGCGTCTCGAGAGGACAGCAGCGTTGAGAATCTGGCTATCCAGAGTATTTGTCAGGATAAGCCAATGAATCCTGATTTTGTCCAGAGTGGCAACAACAGGTTAACCATTAAGCACTGGAGGCCAGTTAGCCAGCATGGAACTGAAAATCCAGTCCCAGTTCAAAATGATGAGGCAAAAGCTGATTCAATTAATGGAAATGGAAACCTGTCAGACCCAAGTTGCATAACGTCATGCAGTACAGATGGTAGTGATATTGGTTTTGAAAACAGTTTCTCCGATTTTGAGAGCAGAGTGGGTCCAGTAAGCTTACAGTTATCCAGCAATGCGGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCTTTGTCGTCAGATCATTTGGTATTGGTAGTTTCCTCTGACGCCGAACCTCCTGGATGCCAGGATACTAGAATAGCAGTAGCAGAGTGTCAATCATCTGAGGTTGACAAATGCAACATTCTCGCGAATGCAGAGAACCGGTTGCCTGCAACCTCCAAAGTTACTAAAGACAAACCCAGAACAAAGCCAGAAAAGGTGTTGAAGATAAAGTATATTCCCAAACAGAAAACAGCTATCTAA 2073 0.4395 MPAIDAKPRGSDGSLDLMKSDSDGKVETIVRHTFGREPFFSFPARADNPVQWIQLLHALDQQGVSSTFSELPGWPLLYPLKIQLQKCDKCPREFCSSINYRRHVRVHHRLKKLDKDSTKNRDLLGAYWDKLSVEEAKEVVSLKDVMLEGVPGSLISEALTTLIQRPGFSPLPHYYLRAGAALLDIVQSKPSSFPLSSQELFSILDDASEKTCLCGTAVSMQRYVFDGEAGKVGLEPKNLVACTSFLLEQKLVNAWLADKDAEALRCHRQLVEEEEAAQRRQAEILERKRQKKLRQKDQKTREHRHEEEFKRNIDSTVDALSAADTSLVTCDLEAHDPETFADSTPSHALLQFPDTNEGTDGNVHSEYDFGMDQYIEQASARRQNRRRAAAARRQGLPKPQWAVANGLHECQNSPISKIEVIQKDETHCDQRAATIVNGSKVWSRKSKPEIDRMVSESRVEKEPDQVNNHEVLIGSISISLGNCSQPEGIAVASREDSSVENLAIQSICQDKPMNPDFVQSGNNRLTIKHWRPVSQHGTENPVPVQNDEAKADSINGNGNLSDPSCITSCSTDGSDIGFENSFSDFESRVGPVSLQLSSNAAKAFLAQRWKEALSSDHLVLVVSSDAEPPGCQDTRIAVAECQSSEVDKCNILANAENRLPATSKVTKDKPRTKPEKVLKIKYIPKQKTAI* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2901 690 MobiDBLite consensus disorder prediction 287 309 - -
Aev05g2901 690 ProSitePatterns Zinc finger C2H2 type domain signature. 87 108 IPR013087 -
Aev05g2901 690 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Aev05g2901 690 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 12 688 - -
Aev05g2901 690 Coils Coil 268 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2901 Aev-Chr5 29816728 29821411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2901 15 687 C2H2 Transcription Factor Family AT4G25610 39.942 1.12e-143 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g2901 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2901 - - gmx:100809067 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2901 05 29816728 29821411 Aev05g2901 05 29816728 29821411 ECH
Aev05g2901 05 29816728 29821411 Aev09g2212 09 24843811 24847307 PCT