Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2886 ATGTCGTCGCCGGGATTCACCGGCGCCGGAGCATCCGAGTTCTTCGCCGGAGCAGGCCGATCAACCACCATGAACAACCCGAGCGCTGCCGCCGCAACATCCGCCACCAGCAACAACCACCTCCTCCACCCATCTCACCCTCTCTACCGAACCCAGCAGCAACTCCCCGCACTGTTTCTAGATCCTTCTTCTCAGATCGCACCTCGCCAACCACCAACAACCACCCTCATCGGTAAACGCACCCTCGCCGAATTCCAAACCCAGCAACACCAACAACAAAACCACCTCCTCAACCCCAACAACCTCACCCATAACAGCCTTAACCACAACCATCACGTTCTTTCAAACCTCCTTCTCCGTTCCGTGAAGCCCAGAACGGCGACGTTTCACAACTCCTCCCCTCTCTCCCCTTTGGATTTTTCAATCCCAGAATTGCATAGCGCTTCTTCTCATGGGTTCCAAACGCAGCGTTTTGGCATGCCCCTGCTTCACCAACTTCGCCCCAACCCTATTAACCTCCCTAACCACAACAACAATAACAACATGGGGTTGCCTATCACAAACTCTGTTCTCCAGAACCCGAATTTCCCTTTCCGGAGCTCCAATTTGGGTCAGGCTCCGAACCGGGTTCAACCTCCCGAACCGGAGAAGAAGATCATGGACCACAGGCTTCAGGAGCTGGAGAAGCAGCTTCTAGAAGATGAAGAGGAAGGAGAAGCCGATGCGGCCTCTGTTATTACAACCAGCGAGTGGTCAGAGACCATTCAGAATCTCATGGGTAACGGGTCGACCCAGAAACCCGCTTCGTCATCACCCACATCGTCCACAACGTCTTCGACTTCTTCATCTTCTTCTGTGGCTTCGCCTGCTACAGGGTGCTGGAAGCAGAGCCTAATGGAAGCCGCATCTGCAATCTCAGAAGGTAAGAATGATGCTGCTTCGGAGATCCTGACCCGGATGGGTCAAGTTTCAAACCCGAATGCGAATTCGGATCAGAGGTTGAAGGTTTGCATGGTTTCGGCGCTGAAATCGAGGATTAATCCGGTTGAGAATCCTCCCCCAGTGGCCGAGTTGTTCAACACGGAACACGCTGAGTCGACTCAGATACTGTTCGAGAACTCGCTCTGCTTCAAGGTTGGGTTCATGGCCGCGAACCTTGCCATCCTCGAAGCTGCATTTGAGGAGAAACCAAAGGAAGAGAACAACAACAACAACAGTAACAGGTTCTGTATCGTGGATTTTGACATAGGGCAAGGGAAGCAGTACATGAGCCTCCTCTACGAGCTCTCGGCGCGTGGGAGAACGCCTCCGGCGACGGTTAGGATCGTGGCGGTGGCGGAGAGCGGCGGGGAGGAGAGGCTGAGGGCGGTCGGAGACATGCTGCAACGACAGGCGGAGAGGTTCAGGATCGGGTTCGAGTTCAAGGTTGTTGTGGTGACTCAGCGACTCGCCGAGTTGACCCGCGAATCGCTGGGGTGCGACCCGGACGAGCCACTCGCTGTGAATTTCGCATTCAAATTGAACCGAATCCCAGACGAGAGCGTCTCCACGGAGAACCCGCGAGACGAGTTATTGAGGCGCGTGAAGGCACTCGCGCCGCGCGTGGTTACGGTCGTGGAGCAGGAGATGAACGCTAACACAGCGCCGTTTCTAGCGCGCGTGGCTGAGTCGTGCTCGTATTACGGCGCGCTTTTTGACTCGGTTGAGTCAGCCCTGGGTAGGGAGAACTCGGAACGAGTGAAGGTGGAGGAGGGACTGAGTCGGAGGCTGTGCAACTCGGTGGCGTGTGAAGGTAGGGACCGCGTTGAGCGATGCGAGGTTTTCGGGAAATGGCGCGCGCGTATGGGCATGGCGGGGTTGCAGCTGAAGCCACTGAGTCAAAGCGTTGCTGGGTCGATCAAATCGCGACTCGCTGCTCTGGGTAACAACAACCGAGTCAACTCGGGACTCACCGTGAAAGAAGAGAACGGTGGAATTTGCTTTGGATGGATGGGGAGAACTCTCACCGTCGCATCTGCTTGGCGTTAA 2028 0.5572 MSSPGFTGAGASEFFAGAGRSTTMNNPSAAAATSATSNNHLLHPSHPLYRTQQQLPALFLDPSSQIAPRQPPTTTLIGKRTLAEFQTQQHQQQNHLLNPNNLTHNSLNHNHHVLSNLLLRSVKPRTATFHNSSPLSPLDFSIPELHSASSHGFQTQRFGMPLLHQLRPNPINLPNHNNNNNMGLPITNSVLQNPNFPFRSSNLGQAPNRVQPPEPEKKIMDHRLQELEKQLLEDEEEGEADAASVITTSEWSETIQNLMGNGSTQKPASSSPTSSTTSSTSSSSSVASPATGCWKQSLMEAASAISEGKNDAASEILTRMGQVSNPNANSDQRLKVCMVSALKSRINPVENPPPVAELFNTEHAESTQILFENSLCFKVGFMAANLAILEAAFEEKPKEENNNNNSNRFCIVDFDIGQGKQYMSLLYELSARGRTPPATVRIVAVAESGGEERLRAVGDMLQRQAERFRIGFEFKVVVVTQRLAELTRESLGCDPDEPLAVNFAFKLNRIPDESVSTENPRDELLRRVKALAPRVVTVVEQEMNANTAPFLARVAESCSYYGALFDSVESALGRENSERVKVEEGLSRRLCNSVACEGRDRVERCEVFGKWRARMGMAGLQLKPLSQSVAGSIKSRLAALGNNNRVNSGLTVKEENGGICFGWMGRTLTVASAWR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2886 675 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 674 IPR005202 -
Aev05g2886 675 ProSiteProfiles GRAS family profile. 285 675 IPR005202 -
Aev05g2886 675 Pfam GRAS domain family 295 675 IPR005202 -
Aev05g2886 675 MobiDBLite consensus disorder prediction 196 215 - -
Aev05g2886 675 PANTHER SCARECROW-LIKE PROTEIN 8 71 674 IPR030013 -
Aev05g2886 675 Coils Coil 217 237 - -
Aev05g2886 675 MobiDBLite consensus disorder prediction 23 44 - -
Aev05g2886 675 MobiDBLite consensus disorder prediction 258 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2886 Aev-Chr5 29689862 29691889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2886 46 675 GRAS Transcription Factor Family AT5G52510 46.687 2.52e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev05g2886 GRAS 1.5e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2886 - - aip:107644872 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2886 05 29689862 29691889 Aev05g2886 05 29689862 29691889 ECH