Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2873 ATGGTATCCAAAAACCCCAATCCCCCCGACGGATTCTACTTGGACCCCGCCGGCGTCGCGCTCCCTGGCCTCGCCCCCTTTGCCTCCGTCTCCGCCGCCGCCGCCACTGCTGTTTCCGCCGCGAACTCATCGGATGACGCCGCAAAGAAGATCCGGAAGCCGTACACCATCACGAAGTCGAGGGAGAACTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAGCTGTTTGACCGTGACTGGAAAAAGATTGGAGCATTTATTGGATCAAAGACAGTCATACAGATACGTAGCCATGCACAGAAATACTTTTTAAAAGTTCAAAAGAGTGGGACAAGTGAACATCTTCCTCCTCCCAGACCAAAAAGAAAAGCTGCCCATCCTTATCCTCAGAAAGCTCCCAAAAATGCTCCTGTACTCTCACAACTACCTGGATCTATTCAATCTTCATCTGCCTTTGTTGAATCTGGATATATCTTGAATCATGATTCCTCAGCAATGCTTAAAACTCCTATGTTGAACACTGTGGTGTCTCCCCGGTCAAACACCTTGCAAAAATCTACTTTACCTCAAGTACCAAAAGTGAATAATTCGTCCAGTAGCAGTGAAAGCACTCCTAAAGTGCGGCCAGTTGGTGAATCTAATACTCTAGGGGGCTTTCCCTTGAGAGTTCTTCCAGATTTCACTCAAGTATACAGCTTCATTGGTAGTGTATTTGACCCAAATGCAAGTGATCATCTGCAGAAACTGAAAAATATGGACCGTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAACTTAACTAGCCCGGACTTCGAGGATCATAGAAAGGTGCTCTCATCATATGAGATGGAGACAGATAACTTTATCAATGCAGATAGACCCATGCATGATGAGCAGTTGGAGGAGGCTACTGCTTAA 942 0.4671 MVSKNPNPPDGFYLDPAGVALPGLAPFASVSAAAATAVSAANSSDDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFIGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKAPKNAPVLSQLPGSIQSSSAFVESGYILNHDSSAMLKTPMLNTVVSPRSNTLQKSTLPQVPKVNNSSSSSESTPKVRPVGESNTLGGFPLRVLPDFTQVYSFIGSVFDPNASDHLQKLKNMDRIDVETVLLLMRNLSINLTSPDFEDHRKVLSSYEMETDNFINADRPMHDEQLEEATA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2873 313 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Aev05g2873 313 Gene3D - 63 111 - -
Aev05g2873 313 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Aev05g2873 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Aev05g2873 313 SMART sant 60 108 IPR001005 -
Aev05g2873 313 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Aev05g2873 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
Aev05g2873 313 CDD SANT 63 106 IPR001005 -
Aev05g2873 313 MobiDBLite consensus disorder prediction 183 216 - -
Aev05g2873 313 ProSiteProfiles SANT domain profile. 59 110 IPR017884 -
Aev05g2873 313 PANTHER SWI/SNF COMPLEX-RELATED 3 297 - -
Aev05g2873 313 MobiDBLite consensus disorder prediction 183 213 - -
Aev05g2873 313 PANTHER PROTEIN REVEILLE 6 3 297 - -
Aev05g2873 313 MobiDBLite consensus disorder prediction 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2873 Aev-Chr5 29617055 29620815 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g2873 Myb_DNA-binding 3.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2873 - - gmx:100783949 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2873 05 29617055 29620815 Aev09g2193 09 24735008 24738247 ECH
Aev05g2873 05 29617055 29620815 Aev05g2873 05 29617055 29620815 ECH
Aev05g2873 05 29617055 29620815 Aev02g0253 02 1833081 1837334 PCT