Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2856 ATGGGTCATGAAGATTGGGATCTCTCTGCCATAGTTCGAAGTTGCAAAACTGATACTAACAACAACAATGAAGAAGTTCCAACCAACACTGGTTTGGACACACCCATTGGCAACCAACAAGAAAATGAGCAATTTTCTTCATCTTTTCCAAATCTAATGCAATCTTCCAGGACTAATGGGTTCCAAGAGCTACACCAATTCTTTGTGACCTCTAACCCCACCACCACCACTACCACTAGTGCCCATGGCATCAATCCAAATTCTCCCCCTTTTCCTGATTTCACTGCTAGATCCATTGAACAACAACAACATTATTCTCCTTTACTTGTTCCCAAAACTAATTACACCTCCATTGGAGCCTCATCTTCTGGCAGTAATAGTTTCGACAGATTCCAACACCAGCAGCAACCACAACCTCAACCCCAAGAACAAAAGCAGCACAAAAATCAACCACAAGTTCAAGTTCCCCAAACCAGTAGTAGTAGTTCCATGGCCTTATTACAAAACACACAATCATCACAAGCACCAAGATCAAGAAAAAGAAAAAGCCTACAGAAGAAAATGGTGTGCCATGTAACTGCAGATAATCTCTCAGCAGATTTATGGGCATGGCGAAAATACGGTCAAAAACCCATCAAAGGCTCCCCATATCCAAGAAACTACTACAGATGCAGCAGCTGCAAAGGTTGTGGGGCAAGGAAGCAAGTGGAGAGAAGCTTAACCGATCCAGAAATGTTCGTGATTACATACACCGGAGAACACAGGCACGCGAAACCGGTGCACCGAAACTCCCTTGCAGGCAGTACACGGAATAAGACCACCCAACCCATCATATCCACGACCCGACCCGCTCATAACCCGGAATCCCCTGTCTCTGTCTCAGCTGATGAGGATGATAATTCTTCTTCACATCGTACCCCGATGATAAATAATCAAGGAGGTCGTAACAACGACGTAGAAGGTTACGCCAACATCGACGCAGAAGATTCTTGGACAAGGGATGACCGATCGTTGTTGACGGAGCATGTAGTGGCATCATCGGAAGATGATGACGACGATGTTCTTATTCCTAATGATGTTGCTTCTATAGCTTTGTCGGATGCGGTGTTTGTGAATTCTTCATCCTTTGATTTGGAGGGAAAAAAAAACCACACCATTTGA 1161 0.4436 MGHEDWDLSAIVRSCKTDTNNNNEEVPTNTGLDTPIGNQQENEQFSSSFPNLMQSSRTNGFQELHQFFVTSNPTTTTTTSAHGINPNSPPFPDFTARSIEQQQHYSPLLVPKTNYTSIGASSSGSNSFDRFQHQQQPQPQPQEQKQHKNQPQVQVPQTSSSSSMALLQNTQSSQAPRSRKRKSLQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCGARKQVERSLTDPEMFVITYTGEHRHAKPVHRNSLAGSTRNKTTQPIISTTRPAHNPESPVSVSADEDDNSSSHRTPMINNQGGRNNDVEGYANIDAEDSWTRDDRSLLTEHVVASSEDDDDDVLIPNDVASIALSDAVFVNSSSFDLEGKKNHTI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2856 386 MobiDBLite consensus disorder prediction 17 46 - -
Aev05g2856 386 Gene3D WRKY domain 182 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g2856 386 MobiDBLite consensus disorder prediction 265 322 - -
Aev05g2856 386 MobiDBLite consensus disorder prediction 116 187 - -
Aev05g2856 386 MobiDBLite consensus disorder prediction 73 95 - -
Aev05g2856 386 MobiDBLite consensus disorder prediction 304 318 - -
Aev05g2856 386 MobiDBLite consensus disorder prediction 265 297 - -
Aev05g2856 386 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 362 IPR044810 GO:0003700
Aev05g2856 386 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g2856 386 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 362 - -
Aev05g2856 386 SMART WRKY_cls 198 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g2856 386 MobiDBLite consensus disorder prediction 116 178 - -
Aev05g2856 386 ProSiteProfiles WRKY domain profile. 193 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g2856 386 SUPERFAMILY WRKY DNA-binding domain 193 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2856 Aev-Chr5 29534107 29535605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2856 177 289 WRKY Transcription Factor Family AT5G52830 71.681 1.08e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev05g2856 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2856 K13425 - aprc:113866622 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3104 03 29726037 29727358 Aev05g2856 05 29534107 29535605 ECH
Aev05g2856 05 29534107 29535605 Aev05g2856 05 29534107 29535605 ECH
Aev05g2856 05 29534107 29535605 Aev02g0247 02 1777896 1779672 PCT