Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2821 ATGGCGGCGAGGGTAAGGGAGAAGCTATACGTCACCGTTCCGAGTCCTTTCCGGTGTCCAATTTCAATGGACGTCATGAGGTCTCCCGTAAGCCTCTGCACCGGCGTCACATACGATCGCTCCAGCATCCAGCGCTGGCTCGACTCTGGTCATGACACGTGTCCCGCCACTATGCAGGTCCTCCCTTCCAAGGACTTCATACCTAACCTCACCCTCCACCGCCTCATCCGCCTCTGGCTCCTCTCCACCGCCGGCGAACCATCGTCTCCGGGATCTTCACTCTCCGGAGATCGCATCCGTGCTCTCCTCGCCGGGATCCAAACCGGCGCCACGGATTTCGCATCTTCCCTTTCCGAGATTGCAGAATTCGCGAGATTCTCCGCCGAAAATCGACGTCTCCTTGCGAGCTTCTCCGGCTTCGATTCTGCTATTGTTCTCGCCCTCGCTGGGAGACGGTCGCGGATCGAAGCTTCCGAAAACGCGATCGCGATTCTGGATTTGGTTTTCCGGGAGATCGGAAATGTCGGCGCCGGAGAGAAAATCCGGCGGGCGATTTTCGATGCTCGCGAAGATTGCTTCGCGTCGATCGTATTCGTTCTCGAGAACGGATCTGCGAAATCGAAGGTCGAAGCGGTTAGAGTTTTGGAGTTTCTCGCCGGCGATTCTCAATCGAAGCGGTGGTTGGCGGAAACGCGAGGATTGTTGCCGCTTCTCGCGAAGATTCTTGAAGACGGAAGCGTGGAGCTAAACGACGCCGTTTTTTCGCTTTTGGCCAGTGTTTCAGTGACTCAGTCGGCAAAATCTGAGCTCGTCCGTTGCGGAATCGTTGAGACGGTTTCGAAGACGCTACGGAGCGCCACGTGCGGCGGTGTGACGGCGGAGAAGTGCCTTAGGGTGCTGTCGGTGGTGGCGACATGCGCGGATGGGAGGGCAGCGATGGCCAGTGATCCGTCGTGCGCATCGGCGGTGACGGAGAGGCTGGCGAAGGCGGGGAAGGCGGCGGCGGAGGACGCGGTGGCAGTGCTGTGGAGCCTGTGCTGTCTGTGCGGTAACGAGAGGGTGAGGGATGAGGTGGCGAAGCAAAACGGCGTCGCTGTGGTGCTTTTGGTGATGCAGAGAGGGTGCGTGGAGCACGTGAGAAGCATGTGCGTGGATTTAATTAAGGTTCTGAGGAAAAAGAATGGGTTGGCCTTGGCATTGGGAAGCTATGACACCAAAACCACTCATATCAAGCCTTGCTAA 1242 0.5789 MAARVREKLYVTVPSPFRCPISMDVMRSPVSLCTGVTYDRSSIQRWLDSGHDTCPATMQVLPSKDFIPNLTLHRLIRLWLLSTAGEPSSPGSSLSGDRIRALLAGIQTGATDFASSLSEIAEFARFSAENRRLLASFSGFDSAIVLALAGRRSRIEASENAIAILDLVFREIGNVGAGEKIRRAIFDAREDCFASIVFVLENGSAKSKVEAVRVLEFLAGDSQSKRWLAETRGLLPLLAKILEDGSVELNDAVFSLLASVSVTQSAKSELVRCGIVETVSKTLRSATCGGVTAEKCLRVLSVVATCADGRAAMASDPSCASAVTERLAKAGKAAAEDAVAVLWSLCCLCGNERVRDEVAKQNGVAVVLLVMQRGCVEHVRSMCVDLIKVLRKKNGLALALGSYDTKTTHIKPC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2821 413 CDD RING-Ubox_PUB 17 59 IPR045210 -
Aev05g2821 413 ProSiteProfiles U-box domain profile. 12 86 IPR003613 GO:0004842|GO:0016567
Aev05g2821 413 SUPERFAMILY ARM repeat 179 390 IPR016024 -
Aev05g2821 413 Gene3D - 114 406 IPR011989 -
Aev05g2821 413 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 87 IPR013083 -
Aev05g2821 413 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 413 - -
Aev05g2821 413 SUPERFAMILY RING/U-box 9 81 - -
Aev05g2821 413 Pfam U-box domain 13 82 IPR003613 GO:0004842|GO:0016567
Aev05g2821 413 SMART Ubox_2 16 79 IPR003613 GO:0004842|GO:0016567
Aev05g2821 413 PANTHER WDSAM1 PROTEIN 7 413 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2821 Aev-Chr5 29237964 29239205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2821 10 412 U-box Gene Family AT3G18710 37.237 2.83e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2821 - - adu:107491069 584.719