Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2806 ATGCTGGGGGACTCAACTGTGTTGGGTACTGGAGGAGGTAGCTCTGGTGATGCAGTATCGACCGCTGCTGTGCTGCCAGCATCAGCAGTTACAAATACTGCATCACCAGATGCCGCAGTAATTGGCGGTGATGGTGGCAACGGCAGCGGCGGCGGCGGAGGATCATCAAATTCAGGAGATGATGAGCGAGGTAGAGGAGAGGAAGGTGAGAGGAGCTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTCTTGCTTTGTTGAAGATACGGTCAGATATGGACGTTGCCTTTCGTGATGCCAGTGTTAAGGGTCCCTTATGGGAAGAGGTCTCAAGGAAACTAGCAGAGCTTGGGTACCAGAGGAATGCAAAGAAATGCAAAGAGAAATTTGAGAATGTGTACAAGTACCACAAGAGAACCAAAGAAGGTAGAAGTGGGAAATCAGATGGGAAAACATATAGGTTCTTTGATCAATTAGAGGCACTTGAAAACAACCCAATTCATCATCAATCCCCAAGAACAGCACAAACACAAGCACCACTACCTGCAACACCAGTCTCAATAGTGAAAACTACTGCATCATTGCCCCAACAAGTGATGATCATGACTACTAATAACACCACTACCCCTATTAGTACTACTACTACTACTAGTACTACTAGTGTTGTCCCAATTTCCATGCCTCAAACACAAACCAATAATGTTCTCCTCAACATCCCCACTATCCCACTTCCTTCATCATACCCACAACAACAAACTAATAACCCTACATACAATTTCCCACCACCACCGTTGCCGTTGCCGTTGCCGTCATCAACAACAAACCCTTCTTCTTTTCCGAGCATACCGACGGAGCTGTTGTCGAATTCGACGAGCTCGATGTCGACCTCGTCGGATGAGACGATAGAGGGGAGGAGGAAGAGGAAGAGGAAGTGGAAGGACTTGTTTGAGAGGCTAATGAAGGAGGTTGTGGAGAAGCAAGAGGAGCTTCAGAGGAGGTTCTTGGAGGCCATAGAGAAAAGAGAGAAAGAGAGAGTTGCGAGAGAAGAGTCATGGAGGGTTCAAGAGTTGCAAAGGATCAATAGAGAGAGGGAAATTCTCGCACAAGAGAGGTCAATTGCTGCTGCTAAAGACCAAGCTGTTATGTCCTTCTTGCAGAAGATTGCTGAACAACAAAATCTCGGGACAACTTTGAACAACATCATTCCCCAAACAACAACAACACCGGCACCAACACCAACACCGCCACCGGCACCAATCGTGCAGCAACAAAAACAAGCACCACAAGCACAAGTTATTACAAGCACTGAATCAGCTTTGGTGGTTCCTTCAGTGGCAAAACAACAAACACATGAAGTGCAACAGGTGATCACGAACATGGAGATTGTGAAAGTTGATAACAACAACAACAATGGTGAGAATTTGGTGACACCAAGCTCTTCAAGGTGGCCAAAAGCTGAAGTTCAGGCACTGATAAATCTAAGGACAAGCCTTGACACAAAGTATCAAGAGAATGGACCAAAGGGTCCACTATGGGAGGAAATTTCATCCTTGATGAGGAAAATTGGTTACAATAGGAATGCTAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAGAGCAACAAGAAGAGGCCACAAGATTCCAAGACTTGTCCTTATTTCCACCAATTGGATGCTCTTTACAGGGAGAGGAACAAGCAAGAGGGCGGCGGCGCCGCCGTGAAGCCAAATGAGACCATGATGGCTCCCCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAGCCAGTGCAGCCGCCGTCCGGTAACGCAGGTAACAATGATTCGTTACCTGCGGACAAACGGCAGCAGCACGAGCATGAGGAGGAGGAAGATGGGGATGATGATGAAGGTAGAGATATGGGTGAAGAGGATGAAGATGAGGAGGAGGACTACGACGATGAGGGCGGTGATAACTATGAGATAGTGGCAAGCAAGCCAGCAGCTTCGGTGGGTGCTTCTGCTGAATAA 2037 0.4772 MLGDSTVLGTGGGSSGDAVSTAAVLPASAVTNTASPDAAVIGGDGGNGSGGGGGSSNSGDDERGRGEEGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYQRNAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYRFFDQLEALENNPIHHQSPRTAQTQAPLPATPVSIVKTTASLPQQVMIMTTNNTTTPISTTTTTSTTSVVPISMPQTQTNNVLLNIPTIPLPSSYPQQQTNNPTYNFPPPPLPLPLPSSTTNPSSFPSIPTELLSNSTSSMSTSSDETIEGRRKRKRKWKDLFERLMKEVVEKQEELQRRFLEAIEKREKERVAREESWRVQELQRINREREILAQERSIAAAKDQAVMSFLQKIAEQQNLGTTLNNIIPQTTTTPAPTPTPPPAPIVQQQKQAPQAQVITSTESALVVPSVAKQQTHEVQQVITNMEIVKVDNNNNNGENLVTPSSSRWPKAEVQALINLRTSLDTKYQENGPKGPLWEEISSLMRKIGYNRNAKRCKEKWENINKYFKKVKESNKKRPQDSKTCPYFHQLDALYRERNKQEGGGAAVKPNETMMAPLMVQPEQQWPPQQPVQPPSGNAGNNDSLPADKRQQHEHEEEEDGDDDEGRDMGEEDEDEEEDYDDEGGDNYEIVASKPAASVGASAE* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2806 678 CDD GT1 76 141 - -
Aev05g2806 678 Coils Coil 309 340 - -
Aev05g2806 678 Gene3D - 78 139 - -
Aev05g2806 678 Gene3D - 483 544 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 245 302 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 256 273 - -
Aev05g2806 678 ProSiteProfiles Myb-like domain profile. 76 134 IPR001005 -
Aev05g2806 678 PANTHER - 31 668 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 274 299 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 60 75 - -
Aev05g2806 678 ProSiteProfiles Myb-like domain profile. 481 539 IPR001005 -
Aev05g2806 678 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 31 668 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 35 77 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 631 660 - -
Aev05g2806 678 MobiDBLite consensus disorder prediction 598 678 - -
Aev05g2806 678 SMART sant 74 136 IPR001005 -
Aev05g2806 678 SMART sant 479 541 IPR001005 -
Aev05g2806 678 CDD GT1 481 546 - -
Aev05g2806 678 Pfam Myb/SANT-like DNA-binding domain 481 568 IPR044822 -
Aev05g2806 678 Pfam Myb/SANT-like DNA-binding domain 76 162 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2806 Aev-Chr5 29107061 29109924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2806 74 607 Trihelix Transcription Factor Family AT1G76890 46.739 1.08e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev05g2806 Myb_DNA-bind_4 2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2806 - - lang:109354958 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2806 05 29107061 29109924 Aev09g2134 09 24372271 24375213 PCT