Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2805 ATGCAGCTTGGGAGCTCAAGTGTGTTGGAGATCTCCTCCTCCTCCCCTTGCAAGCCAGACATGCCGGTTACCGCGGCGCCACGCGAAGAAGCGGCGCCGCGGGAAGGCGCTGATGTGGTTGAGATGGAAGTAGTGGATGCGAATAACAACAATAATAATAATTCAGGTGAATTATTAGAAGAGAAAGGAAGAGAATTAGGAGTAGTAGGTGGTGGTGGTGGTGAGGAAGGTGATAAGATGAATAGTTTTGGAGGAAACCGGTGGCCCCGACAAGAAACTTTGGCTCTCTTGAAGATAAGGTCAGATATGGATGCAGTTTTTCGTGATTCAAGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAACTAGGAGAGCTTGGATATGAGCGAAGTGCAAAGAAGTGCAAGGAGAAATTTGAGAATGTGTACAAGTACCACAAGAGAACCAAAGAGAGTAGAAGTGGGAAATCAGAGGGAAAAACATACAAATTCTTTGATCAATTACAAGCCCTTGAGAACCATAATCATCATCATCAATTCACACTCTCATCATCATCAAATCAGCCAAAATCACAACCTGTTTTAGCAACAACAAATATTAGTGATGGCACTATCACTTTTCCATCCACCATTATCTCTCCTTCTTCATTACCATTACCACCACCACCACCACCACCAACAACCAATAATGCTACCACCACCACAACAGTAACAAACACTACTAGAAACCAACAACAATTATCATCACAACAACCAAACAACATTAGTAGTAGTACTGTTGTTGTTGGTGTCCCACATTCCTTGCCCAACAAAAACAACAATAGCAATAATAATAATAGTAACCAACAAATTGTGTTCTCCTCATCACCATCACCAACTTCAACATCTTCCTCCACAGCTTCAGATGAAGGGTTGGAGGAGAGGTACAGGAAGAAGAGGAAGTGGAAGGACTACTTCAGGAGGCTCACAAGGAAGGTCCTCACAAAACAAGAGCAGATGCAGAAGAGGTTCTTGGAAGCCATAGACAAAAGGGAGAGGGAAAGAGTCGCACAGCAAGATTCTTGGAGGATGCAAGAGCTTGCAAGGATCAATAAGGAGCATGAGATCCTTGTCCAAGAAAGATCCAATGCTGCTGCCAAAGATGCTGCTGTTATTGCACTCTTACACAAGTTGTCTGGCCAAGAAAACCCCCCCCAATTGGCTGCACCGCCACCGATGCCGCCGCCCCCGCCGCCGCTGCCAAAAGTATCACAGCCACAACCAATGCCAAAACAGAACAATTTTGAGATCCAAGGAATGAATAATGGGCATAGTAGTGTTGTTATTACTACTACTTCTAATTCTAATTCTACTTCTACTTCTTCAAGGTGGCCAAAAGCAGAGATTCATGCTTTGATAAGGCTGAGGACAAGTCTTGAGGCAAAGTATCAGGAAAATGGGCCAAAAGCACCACTGTGGGAGGACATATCTGCTGGGATGCAGAGGCTTGGGTACAACAGAAATGCTAAAAGGTGCAAAGAGAAATGGGAGAATATCAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAGAGGCGTGAGGATAGCAAGACATGTCCCTATTTCCATGAGCTTGAAGCATTATACAGGGAGAAGAAGAGCAAGAACACCAACAACAACCCCTTTGGAAATAGTTTCCAGAATAATGTGAAGTCCAATGAGATGATGATGATGGAGCCATTGATGGTGCAACCGGAGCAGCAATGGAGGCCTCCACCACAGTATCATGATGAACAGCAAGAAGGTAATAATAAGGAGAATACCACAAGCCAACAGCAAGAAAAAGTATCAGCAGCAGAAGAAACAGAGTTAGAAGAAGAAGATGATGAATATGTTGATGATGATATAGAAGAAGAAGATGGAGATAGTGTTGAAGATGATGATGAAGGAGCAAACCGTTATGAGATTGTGACAAATAATAAACTTTCTTCAGTGGAAACACAGTTGAATGAGACAAGATAG 2007 0.4325 MQLGSSSVLEISSSSPCKPDMPVTAAPREEAAPREGADVVEMEVVDANNNNNNNSGELLEEKGRELGVVGGGGGEEGDKMNSFGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLGELGYERSAKKCKEKFENVYKYHKRTKESRSGKSEGKTYKFFDQLQALENHNHHHQFTLSSSSNQPKSQPVLATTNISDGTITFPSTIISPSSLPLPPPPPPPTTNNATTTTTVTNTTRNQQQLSSQQPNNISSSTVVVGVPHSLPNKNNNSNNNNSNQQIVFSSSPSPTSTSSSTASDEGLEERYRKKRKWKDYFRRLTRKVLTKQEQMQKRFLEAIDKRERERVAQQDSWRMQELARINKEHEILVQERSNAAAKDAAVIALLHKLSGQENPPQLAAPPPMPPPPPPLPKVSQPQPMPKQNNFEIQGMNNGHSSVVITTTSNSNSTSTSSRWPKAEIHALIRLRTSLEAKYQENGPKAPLWEDISAGMQRLGYNRNAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYREKKSKNTNNNPFGNSFQNNVKSNEMMMMEPLMVQPEQQWRPPPQYHDEQQEGNNKENTTSQQQEKVSAAEETELEEEDDEYVDDDIEEEDGDSVEDDDEGANRYEIVTNNKLSSVETQLNETR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2805 668 ProSiteProfiles Myb-like domain profile. 450 514 IPR001005 -
Aev05g2805 668 MobiDBLite consensus disorder prediction 215 230 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 206 309 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 588 612 - -
Aev05g2805 668 PANTHER - 49 657 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 1 38 - -
Aev05g2805 668 CDD GT1 457 521 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 582 668 - -
Aev05g2805 668 ProSiteProfiles Myb-like domain profile. 86 144 IPR001005 -
Aev05g2805 668 Pfam Myb/SANT-like DNA-binding domain 456 543 IPR044822 -
Aev05g2805 668 Pfam Myb/SANT-like DNA-binding domain 86 172 IPR044822 -
Aev05g2805 668 SMART sant 84 146 IPR001005 -
Aev05g2805 668 SMART sant 454 516 IPR001005 -
Aev05g2805 668 MobiDBLite consensus disorder prediction 66 87 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 1 19 - -
Aev05g2805 668 CDD GT1 86 151 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 651 668 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 395 421 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 615 644 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 231 303 - -
Aev05g2805 668 Gene3D - 88 149 - -
Aev05g2805 668 Gene3D - 458 519 - -
Aev05g2805 668 MobiDBLite consensus disorder prediction 399 420 - -
Aev05g2805 668 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 49 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2805 Aev-Chr5 29089262 29092001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2805 69 583 Trihelix Transcription Factor Family AT1G76890 49.719 1.59e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev05g2805 Myb_DNA-bind_4 3.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2805 - - gmx:100807507 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2805 05 29089262 29092001 Aev09g2133 09 24352400 24355057 PCT