Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2753 ATGAGAAGAAGAGGGAGAGAGCTTCTTAGTCTTTGTTGTTCTTTACACTCATCGTTGATGAAGCGTGACTCATTTGCTAAATCACCATCGCTACTTGCTTGTGGCTTTCATGCAACTACTACCACTTTCTCAACCTCTTCTTCTTCTTCTTCGAGAACCCCTTGTGTTGAAGAGGATAAAGAATCATCATCAGCATCCAAGTCCGAGAGGGATTCAATGATTTTAGACCAGTTTAGACAAAGGAAACTCAAAGGGTCTCCTAAAGATTCAAAGGGTAGTCATCATCATCCCCATGTGTCAACGACAGCTTCAGCTTCATCAAGTTCTGAGAAGGGCTTGGAGAATGAGGGTGAGTCCACTATGGTGGTATCCAGCTTTAAGGAGTTGGGTGTGAGTGAGGAGCTCGCTGAGGTGTTGGAAGGGATTGGTGATTTTGTTCCGAGTGAGATACAATGTGTGGTTATTCCAGCTATTTTGGAAGGGAAGAGTGTGTTGTTGAGTTCACCAGCTGAACCTGACAGAACTTTAGCCTACTTGTTGCCCCTTATTCAGCTGCTGAGACGAGATGGAGAATGGCTAGGTTCAAATTCAAAGCATCCTCGAGCTATTGTGCTCTGTGCTACTGAAGAGAAAGCTGCACAGTGCTTCAGTGGTGCAGAATATATAATCCAGAATGCAAAATTGAAGTTGGCAAAGGATCTTGCTTCCCCAGATAATGAGCAGTCAAATGCCTCAATTGGCCTCCTAATTGGAACTCCTTTTGAGATTCTTCAATACATTGAAGAGGGGAGTGTTGCTCCTGCTGAAATAAGATATTTGGTATTGGACGAGGTAGATTCCATGCTTGGTAGTGGCCTTGGTTCTGAAATCCACAAGATTCTCAAACCACTGCAAGATCATGAACCAAAATCTACTGTCAAAAGTTTGCAAACTGTTTTGGTTACATCAACAATTACTGAGGTTTTGGGTGATGAATCCCCCATTGTGAAGCATCTTGAGCGTGATCATGCAGGAAATATTTCTGCAATATCTTTGGAAATGGATCAAACAGAAGTCTTTCACTATACAGAGTCCCTGGATGCTCTTAGGGAAAAACTGGCAGAGGCCATGGATACCCTTTTGTAA 1125 0.4302 MRRRGRELLSLCCSLHSSLMKRDSFAKSPSLLACGFHATTTTFSTSSSSSSRTPCVEEDKESSSASKSERDSMILDQFRQRKLKGSPKDSKGSHHHPHVSTTASASSSSEKGLENEGESTMVVSSFKELGVSEELAEVLEGIGDFVPSEIQCVVIPAILEGKSVLLSSPAEPDRTLAYLLPLIQLLRRDGEWLGSNSKHPRAIVLCATEEKAAQCFSGAEYIIQNAKLKLAKDLASPDNEQSNASIGLLIGTPFEILQYIEEGSVAPAEIRYLVLDEVDSMLGSGLGSEIHKILKPLQDHEPKSTVKSLQTVLVTSTITEVLGDESPIVKHLERDHAGNISAISLEMDQTEVFHYTESLDALREKLAEAMDTLL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2753 374 MobiDBLite consensus disorder prediction 54 96 - -
Aev05g2753 374 Gene3D - 88 323 IPR027417 -
Aev05g2753 374 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 124 152 IPR014014 GO:0003724
Aev05g2753 374 MobiDBLite consensus disorder prediction 41 119 - -
Aev05g2753 374 MobiDBLite consensus disorder prediction 97 119 - -
Aev05g2753 374 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 155 336 IPR014001 -
Aev05g2753 374 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 262 374 IPR002004 GO:0003723
Aev05g2753 374 SMART ultradead3 143 343 IPR014001 -
Aev05g2753 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 321 IPR027417 -
Aev05g2753 374 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 374 - -
Aev05g2753 374 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE 1 374 - -
Aev05g2753 374 SUPERFAMILY PABC (PABP) domain 320 373 IPR036053 GO:0003723
Aev05g2753 374 Gene3D - 324 374 - -
Aev05g2753 374 Pfam DEAD/DEAH box helicase 149 319 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2753 Aev-Chr5 28712540 28714581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2753 123 318 Eukaryotic Initiation Factors Gene Family AT3G19760 24.138 2.27e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2753 - - gmx:100800575 467.233